Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 AP1G1-208ENST00000565009 2494 ntTSL 510.34□□□□□ -0.757e-9■■□□□ 12.5
SRSF1Q07955 ZNF3-201ENST00000292393 512 ntTSL 210.3□□□□□ -0.762e-11■■□□□ 12.5
SRSF1Q07955 DNMT1-211ENST00000586988 711 ntTSL 510.18□□□□□ -0.783e-6■■□□□ 12.5
SRSF1Q07955 MIGA2-204ENST00000445183 3598 ntTSL 210.05□□□□□ -0.83e-6■■□□□ 12.5
SRSF1Q07955 ZNF3-208ENST00000428683 999 ntTSL 29.92□□□□□ -0.822e-11■■□□□ 12.5
SRSF1Q07955 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.837e-9■■□□□ 12.5
SRSF1Q07955 KLHDC4-213ENST00000564484 562 ntTSL 59.78□□□□□ -0.843e-6■■□□□ 12.5
SRSF1Q07955 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.853e-6■■□□□ 12.5
SRSF1Q07955 TTN-AS1-239ENST00000590807 728 ntTSL 59.18□□□□□ -0.947e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC9.18□□□□□ -0.947e-9■■□□□ 12.5
SRSF1Q07955 ZNF3-205ENST00000413658 1441 ntTSL 1 (best) BASIC9.18□□□□□ -0.942e-11■■□□□ 12.5
SRSF1Q07955 VCP-206ENST00000480327 884 ntTSL 58.83□□□□□ -13e-6■■□□□ 12.5
SRSF1Q07955 SNHG1-215ENST00000540904 594 ntTSL 58.5□□□□□ -1.055e-12■■□□□ 12.5
SRSF1Q07955 ZNF76-201ENST00000229405 4651 ntTSL 28.16□□□□□ -1.13e-6■■□□□ 12.5
SRSF1Q07955 TTN-AS1-235ENST00000589907 568 ntTSL 57.58□□□□□ -1.27e-9■■□□□ 12.5
SRSF1Q07955 ZNF3-215ENST00000487620 2660 ntTSL 27.5□□□□□ -1.212e-11■■□□□ 12.5
SRSF1Q07955 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.217e-9■■□□□ 12.5
SRSF1Q07955 SNHG1-209ENST00000538654 2768 ntTSL 27.25□□□□□ -1.255e-12■■□□□ 12.5
SRSF1Q07955 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC7.21□□□□□ -1.265e-12■■□□□ 12.5
SRSF1Q07955 TTN-AS1-240ENST00000590932 701 ntTSL 57.15□□□□□ -1.267e-9■■□□□ 12.5
SRSF1Q07955 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.272e-11■■□□□ 12.5
SRSF1Q07955 TTN-AS1-249ENST00000592750 619 ntTSL 56.93□□□□□ -1.37e-9■■□□□ 12.5
SRSF1Q07955 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.37e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.8□□□□□ -1.327e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-269ENST00000629117 710 ntTSL 56.74□□□□□ -1.337e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-248ENST00000592689 767 ntTSL 56.68□□□□□ -1.347e-9■■□□□ 12.5
SRSF1Q07955 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.362e-11■■□□□ 12.5
SRSF1Q07955 TTN-AS1-257ENST00000625480 633 ntTSL 56.46□□□□□ -1.387e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-262ENST00000626954 864 ntTSL 56.46□□□□□ -1.387e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-260ENST00000626138 693 ntTSL 56.46□□□□□ -1.387e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-258ENST00000625536 693 ntTSL 56.42□□□□□ -1.387e-9■■□□□ 12.5
SRSF1Q07955 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.382e-11■■□□□ 12.5
SRSF1Q07955 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.91□□□□□ -1.465e-12■■□□□ 12.5
SRSF1Q07955 AP1G1-203ENST00000450149 1166 ntTSL 25.86□□□□□ -1.477e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-247ENST00000592630 666 ntTSL 55.62□□□□□ -1.517e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-261ENST00000626517 418 ntTSL 55.61□□□□□ -1.517e-9■■□□□ 12.5
SRSF1Q07955 SNHG1-224ENST00000545688 610 ntTSL 35.58□□□□□ -1.525e-12■■□□□ 12.5
SRSF1Q07955 TTN-AS1-259ENST00000626117 572 ntTSL 55.55□□□□□ -1.527e-9■■□□□ 12.5
SRSF1Q07955 SNHG1-207ENST00000537965 578 ntTSL 55.36□□□□□ -1.555e-12■■□□□ 12.5
SRSF1Q07955 TTN-AS1-266ENST00000628296 483 ntTSL 55.36□□□□□ -1.557e-9■■□□□ 12.5
SRSF1Q07955 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.27□□□□□ -1.575e-12■■□□□ 12.5
SRSF1Q07955 TTN-AS1-241ENST00000591332 528 ntTSL 55.2□□□□□ -1.587e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.01□□□□□ -1.617e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.97□□□□□ -1.617e-9■■□□□ 12.5
SRSF1Q07955 DNMT1-210ENST00000586800 583 ntTSL 34.95□□□□□ -1.623e-6■■□□□ 12.5
SRSF1Q07955 SNHG1-214ENST00000540865 784 ntTSL 54.93□□□□□ -1.625e-12■■□□□ 12.5
SRSF1Q07955 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.55□□□□□ -1.685e-12■■□□□ 12.5
SRSF1Q07955 SNHG1-203ENST00000537024 532 ntTSL 54.45□□□□□ -1.75e-12■■□□□ 12.5
SRSF1Q07955 SNHG1-220ENST00000544550 636 ntTSL 24.44□□□□□ -1.75e-12■■□□□ 12.5
SRSF1Q07955 TTN-AS1-254ENST00000610290 647 ntTSL 54.4□□□□□ -1.717e-9■■□□□ 12.5
SRSF1Q07955 TTN-AS1-233ENST00000589830 287 ntTSL 54.35□□□□□ -1.717e-9■■□□□ 12.5
SRSF1Q07955 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.32□□□□□ -1.725e-12■■□□□ 12.5
SRSF1Q07955 SNHG1-222ENST00000545308 646 ntTSL 23.97□□□□□ -1.775e-12■■□□□ 12.5
SRSF1Q07955 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.79□□□□□ -1.87e-9■■□□□ 12.5
SRSF1Q07955 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.74□□□□□ -1.815e-12■■□□□ 12.5
SRSF1Q07955 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.73□□□□□ -1.815e-12■■□□□ 12.5
SRSF1Q07955 SNHG1-202ENST00000535689 550 ntTSL 23.43□□□□□ -1.865e-12■■□□□ 12.5
SRSF1Q07955 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.933e-6■■□□□ 12.5
SRSF1Q07955 MIR3618-201ENST00000580330 88 ntBASIC1.36□□□□□ -2.193e-6■■□□□ 12.5
SRSF1Q07955 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.982e-7■■□□□ 12.5
SRSF1Q07955 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.08■□□□□ 0.82e-7■■□□□ 12.5
SRSF1Q07955 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)20.07■□□□□ 0.82e-7■■□□□ 12.5
SRSF1Q07955 SNRNP70-209ENST00000601065 1757 ntTSL 319.01■□□□□ 0.632e-7■■□□□ 12.5
SRSF1Q07955 SNRNP70-202ENST00000401730 3144 ntTSL 212.88□□□□□ -0.352e-7■■□□□ 12.5
SRSF1Q07955 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.316e-7■■□□□ 12.5
SRSF1Q07955 ZNF274-208ENST00000600704 467 ntTSL 419.42■□□□□ 0.72e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-213ENST00000619307 1566 ntTSL 218.56■□□□□ 0.562e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-214ENST00000621145 1646 ntTSL 218.45■□□□□ 0.542e-6■■□□□ 12.5
SRSF1Q07955 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.02■□□□□ 0.322e-6■■□□□ 12.5
SRSF1Q07955 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 02e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-207ENST00000597528 709 ntTSL 514.79□□□□□ -0.042e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-204ENST00000594248 2156 ntTSL 214.51□□□□□ -0.092e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.142e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.88□□□□□ -0.192e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.262e-6■■□□□ 12.5
SRSF1Q07955 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.1□□□□□ -0.312e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-205ENST00000594839 544 ntTSL 410.96□□□□□ -0.652e-6■■□□□ 12.5
SRSF1Q07955 DYNC1LI2-209ENST00000565532 744 ntTSL 510.92□□□□□ -0.662e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-211ENST00000615675 1259 ntTSL 210.88□□□□□ -0.672e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.712e-6■■□□□ 12.5
SRSF1Q07955 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC10.26□□□□□ -0.772e-6■■□□□ 12.5
SRSF1Q07955 DYNC1LI2-204ENST00000561727 502 ntTSL 49.46□□□□□ -0.92e-6■■□□□ 12.5
SRSF1Q07955 GTPBP2-207ENST00000459959 721 ntTSL 27.77□□□□□ -1.172e-6■■□□□ 12.5
SRSF1Q07955 PNISR-206ENST00000476159 537 ntTSL 35.31□□□□□ -1.563e-8■■□□□ 12.5
SRSF1Q07955 RRP7BP-203ENST00000437211 1778 ntTSL 1 (best)17.19■□□□□ 0.343e-10■■□□□ 12.5
SRSF1Q07955 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.08■□□□□ 0.173e-10■■□□□ 12.5
SRSF1Q07955 LRPPRC-205ENST00000447246 1209 ntTSL 1 (best)15.87■□□□□ 0.133e-10■■□□□ 12.5
SRSF1Q07955 RRP7BP-205ENST00000566851 833 ntBASIC14.49□□□□□ -0.093e-10■■□□□ 12.5
SRSF1Q07955 RRP7BP-204ENST00000458605 2332 ntTSL 1 (best)14.41□□□□□ -0.13e-10■■□□□ 12.5
SRSF1Q07955 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.34□□□□□ -0.113e-10■■□□□ 12.5
SRSF1Q07955 RRP7BP-202ENST00000421116 729 ntTSL 310.59□□□□□ -0.713e-10■■□□□ 12.5
SRSF1Q07955 PRAME-209ENST00000439106 891 ntAPPRIS ALT2 TSL 313.14□□□□□ -0.315e-14■■□□□ 12.5
SRSF1Q07955 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.365e-14■■□□□ 12.5
SRSF1Q07955 PRAME-207ENST00000420709 705 ntAPPRIS ALT2 TSL 212.58□□□□□ -0.45e-14■■□□□ 12.5
SRSF1Q07955 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.65e-14■■□□□ 12.5
SRSF1Q07955 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.615e-14■■□□□ 12.5
SRSF1Q07955 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.745e-14■■□□□ 12.5
SRSF1Q07955 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.815e-14■■□□□ 12.5
SRSF1Q07955 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.815e-14■■□□□ 12.5
SRSF1Q07955 PRAME-213ENST00000492657 2831 ntTSL 1 (best)9.73□□□□□ -0.855e-14■■□□□ 12.5
Retrieved 100 of 14,836 protein–RNA pairs in 189.6 ms