RNA–Protein interactions for RNA: ENST00000586800.5

DNMT1-210, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-210ENST00000586800 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
DNMT1-210ENST00000586800 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
DNMT1-210ENST00000586800 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
DNMT1-210ENST00000586800 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
DNMT1-210ENST00000586800 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
DNMT1-210ENST00000586800 FOXD1Q16676 465 aa14.8□□□□□ -0.04
DNMT1-210ENST00000586800 ADRA2BP18089 450 aa14.58□□□□□ -0.08
DNMT1-210ENST00000586800 PPP6R1Q9UPN7 881 aa14.53□□□□□ -0.08
DNMT1-210ENST00000586800 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
DNMT1-210ENST00000586800 KCNA4P22459 653 aa13.79□□□□□ -0.2
DNMT1-210ENST00000586800 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
DNMT1-210ENST00000586800 MSH5O43196 834 aa13.5□□□□□ -0.25
DNMT1-210ENST00000586800 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
DNMT1-210ENST00000586800 SCAF1Q9H7N4 1312 aaKnown RBP13.33□□□□□ -0.28
DNMT1-210ENST00000586800 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
DNMT1-210ENST00000586800 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
DNMT1-210ENST00000586800 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
DNMT1-210ENST00000586800 CNKSR2Q8WXI2 1034 aa13.21□□□□□ -0.29
DNMT1-210ENST00000586800 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-210ENST00000586800 NISCHQ9Y2I1 1504 aa12.92□□□□□ -0.34
DNMT1-210ENST00000586800 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
DNMT1-210ENST00000586800 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-210ENST00000586800 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
DNMT1-210ENST00000586800 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-210ENST00000586800 ZBTB22O15209 634 aa12.66□□□□□ -0.38
DNMT1-210ENST00000586800 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
DNMT1-210ENST00000586800 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
DNMT1-210ENST00000586800 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
DNMT1-210ENST00000586800 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
DNMT1-210ENST00000586800 POTEDQ86YR6 584 aa12.28□□□□□ -0.44
DNMT1-210ENST00000586800 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
DNMT1-210ENST00000586800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.463e-7■■■□□ 16.2
DNMT1-210ENST00000586800 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
DNMT1-210ENST00000586800 U3KPZ7 1027 aaPredicted RBP11.96□□□□□ -0.49
DNMT1-210ENST00000586800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-210ENST00000586800 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
DNMT1-210ENST00000586800 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
DNMT1-210ENST00000586800 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-210ENST00000586800 APLP2Q06481 763 aa11.75□□□□□ -0.53
DNMT1-210ENST00000586800 FKBP8Q14318 412 aa11.71□□□□□ -0.53
DNMT1-210ENST00000586800 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
DNMT1-210ENST00000586800 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
DNMT1-210ENST00000586800 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
DNMT1-210ENST00000586800 RNF39Q9H2S5 420 aa11.59□□□□□ -0.55
DNMT1-210ENST00000586800 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
DNMT1-210ENST00000586800 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
DNMT1-210ENST00000586800 SLC24A1O60721 1099 aa11.53□□□□□ -0.56
DNMT1-210ENST00000586800 CAPN15O75808 1086 aa11.53□□□□□ -0.56
DNMT1-210ENST00000586800 C1QBPQ07021 282 aaKnown RBP11.47□□□□□ -0.57
DNMT1-210ENST00000586800 POLA2Q14181 598 aa11.42□□□□□ -0.58
DNMT1-210ENST00000586800 FBLN2P98095 1184 aa11.38□□□□□ -0.59
DNMT1-210ENST00000586800 ABCB7O75027 752 aa11.35□□□□□ -0.59
DNMT1-210ENST00000586800 CCDC180Q9P1Z9 1646 aa11.35□□□□□ -0.59
DNMT1-210ENST00000586800 MKRN4PQ13434 485 aaPredicted RBP11.34□□□□□ -0.59
DNMT1-210ENST00000586800 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
DNMT1-210ENST00000586800 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-210ENST00000586800 ABCC9O60706 1549 aa11.23□□□□□ -0.61
DNMT1-210ENST00000586800 DSG3P32926 999 aa11.17□□□□□ -0.62
DNMT1-210ENST00000586800 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
DNMT1-210ENST00000586800 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
DNMT1-210ENST00000586800 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-210ENST00000586800 PROM2Q8N271 834 aa11.07□□□□□ -0.64
DNMT1-210ENST00000586800 OSCARQ8IYS5 282 aa11.02□□□□□ -0.65
DNMT1-210ENST00000586800 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-210ENST00000586800 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
DNMT1-210ENST00000586800 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.65
DNMT1-210ENST00000586800 SPDYE6P0CI01 402 aa10.96□□□□□ -0.65
DNMT1-210ENST00000586800 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.65
DNMT1-210ENST00000586800 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
DNMT1-210ENST00000586800 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
DNMT1-210ENST00000586800 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
DNMT1-210ENST00000586800 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
DNMT1-210ENST00000586800 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
DNMT1-210ENST00000586800 RB1CC1Q8TDY2 1594 aa10.78□□□□□ -0.68
DNMT1-210ENST00000586800 PLCD3Q8N3E9 789 aa10.77□□□□□ -0.69
DNMT1-210ENST00000586800 NACADO15069 1562 aa10.77□□□□□ -0.69
DNMT1-210ENST00000586800 MIER1Q8N108 512 aa10.73□□□□□ -0.69
DNMT1-210ENST00000586800 ZCCHC6Q5VYS8 1495 aaKnown RBP10.73□□□□□ -0.69
DNMT1-210ENST00000586800 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
DNMT1-210ENST00000586800 SPOCK2Q92563 424 aa10.7□□□□□ -0.7
DNMT1-210ENST00000586800 MYO15BQ96JP2 1530 aa10.68□□□□□ -0.7
DNMT1-210ENST00000586800 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
DNMT1-210ENST00000586800 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
DNMT1-210ENST00000586800 DCAF1Q9Y4B6 1507 aa10.64□□□□□ -0.71
DNMT1-210ENST00000586800 PKD2Q13563 968 aa10.62□□□□□ -0.71
DNMT1-210ENST00000586800 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
DNMT1-210ENST00000586800 HAP1P54257 671 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-210ENST00000586800 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-210ENST00000586800 CLEC11AQ9Y240 323 aa10.57□□□□□ -0.72
DNMT1-210ENST00000586800 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-210ENST00000586800 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-210ENST00000586800 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-210ENST00000586800 REM2Q8IYK8 340 aaPredicted RBP10.5□□□□□ -0.73
DNMT1-210ENST00000586800 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
DNMT1-210ENST00000586800 VSIG10Q8N0Z9 540 aa10.46□□□□□ -0.73
DNMT1-210ENST00000586800 SCRIBQ14160 1630 aa10.45□□□□□ -0.74
DNMT1-210ENST00000586800 SHROOM4Q9ULL8 1493 aa10.43□□□□□ -0.74
DNMT1-210ENST00000586800 BCANQ96GW7 911 aa10.42□□□□□ -0.74
DNMT1-210ENST00000586800 RGL2O15211 777 aa10.41□□□□□ -0.74
DNMT1-210ENST00000586800 BBXQ8WY36 941 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms