RNA–Protein interactions for RNA: ENST00000447246.1

LRPPRC-205, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best)

Gene LRPPRC, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-205ENST00000447246 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
LRPPRC-205ENST00000447246 ABCC9O60706 1549 aa35.68■■■■□ 3.3
LRPPRC-205ENST00000447246 DNAJC5BQ9UF47 199 aa34.46■■■■□ 3.11
LRPPRC-205ENST00000447246 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
LRPPRC-205ENST00000447246 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
LRPPRC-205ENST00000447246 PABPN1Q86U42 306 aaKnown RBP eCLIP33.04■■■□□ 2.88
LRPPRC-205ENST00000447246 NACADO15069 1562 aa32.79■■■□□ 2.84
LRPPRC-205ENST00000447246 UNC13AQ9UPW8 1703 aa32.7■■■□□ 2.83
LRPPRC-205ENST00000447246 DCAF8L2P0C7V8 631 aa32.52■■■□□ 2.8
LRPPRC-205ENST00000447246 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
LRPPRC-205ENST00000447246 DNAJC5Q9H3Z4 198 aa32.35■■■□□ 2.77
LRPPRC-205ENST00000447246 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.75
LRPPRC-205ENST00000447246 CC2D2AQ9P2K1 1620 aa32.13■■■□□ 2.73
LRPPRC-205ENST00000447246 MYO15BQ96JP2 1530 aa31.89■■■□□ 2.7
LRPPRC-205ENST00000447246 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
LRPPRC-205ENST00000447246 SHROOM4Q9ULL8 1493 aa31.75■■■□□ 2.67
LRPPRC-205ENST00000447246 SCRIBQ14160 1630 aa31.47■■■□□ 2.63
LRPPRC-205ENST00000447246 ZCCHC6Q5VYS8 1495 aaKnown RBP31.16■■■□□ 2.58
LRPPRC-205ENST00000447246 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
LRPPRC-205ENST00000447246 CUX2O14529 1486 aa31.08■■■□□ 2.57
LRPPRC-205ENST00000447246 ERCC6Q03468 1493 aa30.84■■■□□ 2.53
LRPPRC-205ENST00000447246 TRIM41Q8WV44 630 aa30.62■■■□□ 2.49
LRPPRC-205ENST00000447246 NESP48681 1621 aa30.35■■■□□ 2.45
LRPPRC-205ENST00000447246 NCAPD3P42695 1498 aa30.29■■■□□ 2.44
LRPPRC-205ENST00000447246 THOC2Q8NI27 1593 aaKnown RBP30.23■■■□□ 2.43
LRPPRC-205ENST00000447246 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
LRPPRC-205ENST00000447246 SMARCA2P51531 1590 aa30.04■■■□□ 2.4
LRPPRC-205ENST00000447246 HMGXB3Q12766 1538 aa29.99■■■□□ 2.39
LRPPRC-205ENST00000447246 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
LRPPRC-205ENST00000447246 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
LRPPRC-205ENST00000447246 LAMC3Q9Y6N6 1575 aa29.81■■■□□ 2.36
LRPPRC-205ENST00000447246 BAZ1BQ9UIG0 1483 aaKnown RBP29.77■■■□□ 2.36
LRPPRC-205ENST00000447246 BAZ1AQ9NRL2 1556 aaPredicted RBP29.67■■■□□ 2.34
LRPPRC-205ENST00000447246 PDS5BQ9NTI5 1447 aa29.66■■■□□ 2.34
LRPPRC-205ENST00000447246 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
LRPPRC-205ENST00000447246 WDR62O43379 1518 aa29.5■■■□□ 2.31
LRPPRC-205ENST00000447246 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.31
LRPPRC-205ENST00000447246 OSCARQ8IYS5 282 aa29.45■■■□□ 2.31
LRPPRC-205ENST00000447246 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
LRPPRC-205ENST00000447246 RIMBP3CA6NJZ7 1639 aa29.33■■■□□ 2.29
LRPPRC-205ENST00000447246 RIMBP3BA6NNM3 1639 aa29.33■■■□□ 2.29
LRPPRC-205ENST00000447246 RIMBP3Q9UFD9 1639 aa29.33■■■□□ 2.29
LRPPRC-205ENST00000447246 MROH2BQ7Z745 1585 aa29.23■■■□□ 2.27
LRPPRC-205ENST00000447246 CEP164Q9UPV0 1460 aa29.2■■■□□ 2.26
LRPPRC-205ENST00000447246 ARHGEF11O15085 1522 aa29.09■■■□□ 2.25
LRPPRC-205ENST00000447246 FANCD2Q9BXW9 1451 aa29.06■■■□□ 2.24
LRPPRC-205ENST00000447246 TRHP20396 242 aaPredicted RBP28.99■■■□□ 2.23
LRPPRC-205ENST00000447246 AEBP2Q6ZN18 517 aaPredicted RBP28.95■■■□□ 2.22
LRPPRC-205ENST00000447246 URB2Q14146 1524 aaKnown RBP28.94■■■□□ 2.22
LRPPRC-205ENST00000447246 CYB5RLQ6IPT4 315 aa28.93■■■□□ 2.22
LRPPRC-205ENST00000447246 WIZO95785 1651 aa28.85■■■□□ 2.21
LRPPRC-205ENST00000447246 ZNF608Q9ULD9 1512 aaPredicted RBP28.79■■■□□ 2.2
LRPPRC-205ENST00000447246 CFTRP13569 1480 aa28.77■■■□□ 2.2
LRPPRC-205ENST00000447246 ARAP1Q96P48 1450 aa28.76■■■□□ 2.19
LRPPRC-205ENST00000447246 IFT140Q96RY7 1462 aa28.62■■■□□ 2.17
LRPPRC-205ENST00000447246 CHD1O14646 1710 aa28.59■■■□□ 2.17
LRPPRC-205ENST00000447246 EIF4G3O43432 1585 aaKnown RBP28.57■■■□□ 2.16
LRPPRC-205ENST00000447246 RSF1Q96T23 1441 aaPredicted RBP28.44■■■□□ 2.14
LRPPRC-205ENST00000447246 PRDM2Q13029 1718 aa28.44■■■□□ 2.14
LRPPRC-205ENST00000447246 FBLN2P98095 1184 aa28.4■■■□□ 2.14
LRPPRC-205ENST00000447246 TOPBP1Q92547 1522 aa28.39■■■□□ 2.14
LRPPRC-205ENST00000447246 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.131e-7■■■■■ 34.9
LRPPRC-205ENST00000447246 TOP2AP11388 1531 aaKnown RBP28.34■■■□□ 2.13
LRPPRC-205ENST00000447246 TARBP1Q13395 1621 aaKnown RBP28.24■■■□□ 2.11
LRPPRC-205ENST00000447246 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
LRPPRC-205ENST00000447246 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
LRPPRC-205ENST00000447246 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
LRPPRC-205ENST00000447246 SNAPC4Q5SXM2 1469 aa28.05■■■□□ 2.08
LRPPRC-205ENST00000447246 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
LRPPRC-205ENST00000447246 POLA1P09884 1462 aaPredicted RBP28.04■■■□□ 2.08
LRPPRC-205ENST00000447246 SYNJ1O43426 1573 aa28.02■■■□□ 2.08
LRPPRC-205ENST00000447246 RAD54L2Q9Y4B4 1467 aa28.01■■■□□ 2.07
LRPPRC-205ENST00000447246 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
LRPPRC-205ENST00000447246 GAPVD1Q14C86 1478 aa27.95■■■□□ 2.07
LRPPRC-205ENST00000447246 CHMP7Q8WUX9 453 aaPredicted RBP27.93■■■□□ 2.06
LRPPRC-205ENST00000447246 ILDR1Q86SU0 546 aaPredicted RBP27.92■■■□□ 2.06
LRPPRC-205ENST00000447246 SOGA1O94964 1423 aa27.85■■■□□ 2.05
LRPPRC-205ENST00000447246 MAGI1Q96QZ7 1491 aaPredicted RBP27.83■■■□□ 2.05
LRPPRC-205ENST00000447246 SYNJ2O15056 1496 aa27.77■■■□□ 2.04
LRPPRC-205ENST00000447246 ERCC6L2Q5T890 1561 aa27.76■■■□□ 2.03
LRPPRC-205ENST00000447246 WDR97A6NE52 1622 aa27.74■■■□□ 2.03
LRPPRC-205ENST00000447246 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
LRPPRC-205ENST00000447246 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
LRPPRC-205ENST00000447246 KIF13AQ9H1H9 1805 aa27.69■■■□□ 2.02
LRPPRC-205ENST00000447246 PBRM1Q86U86 1689 aa27.64■■■□□ 2.02
LRPPRC-205ENST00000447246 KDM4FA0A1W2PPD8 638 aa27.56■■■□□ 2
LRPPRC-205ENST00000447246 CUX1P39880 1505 aa27.52■■■□□ 2
LRPPRC-205ENST00000447246 CEP170Q5SW79 1584 aa27.52■■■□□ 2
LRPPRC-205ENST00000447246 GRIN2AQ12879 1464 aa27.41■■□□□ 1.98
LRPPRC-205ENST00000447246 ABCA5Q8WWZ7 1642 aa27.39■■□□□ 1.98
LRPPRC-205ENST00000447246 FAM69CQ0P6D2 419 aa27.36■■□□□ 1.97
LRPPRC-205ENST00000447246 SHROOM2Q13796 1616 aa27.36■■□□□ 1.97
LRPPRC-205ENST00000447246 KDM6BO15054 1643 aa27.34■■□□□ 1.97
LRPPRC-205ENST00000447246 NUP160Q12769 1436 aa27.33■■□□□ 1.97
LRPPRC-205ENST00000447246 ABCC10Q5T3U5 1492 aa27.32■■□□□ 1.96
LRPPRC-205ENST00000447246 ADAMTS12P58397 1594 aa27.3■■□□□ 1.96
LRPPRC-205ENST00000447246 DIP2BQ9P265 1576 aa27.28■■□□□ 1.96
LRPPRC-205ENST00000447246 ABCA10Q8WWZ4 1543 aa27.27■■□□□ 1.96
LRPPRC-205ENST00000447246 TSPOAP1O95153 1857 aa27.21■■□□□ 1.95
LRPPRC-205ENST00000447246 PRG4Q92954 1404 aaPredicted RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms