Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.351e-6■□□□□ 10.9
LSM11P83369 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.84□□□□□ -0.351e-6■□□□□ 10.9
LSM11P83369 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.441e-6■□□□□ 10.9
LSM11P83369 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC11.98□□□□□ -0.491e-6■□□□□ 10.9
LSM11P83369 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC11.94□□□□□ -0.51e-6■□□□□ 10.9
LSM11P83369 TMUB2-207ENST00000587630 1191 ntTSL 311.09□□□□□ -0.631e-6■□□□□ 10.9
LSM11P83369 MAN2C1-235ENST00000567163 1356 ntTSL 519.66■□□□□ 0.747e-8■□□□□ 10.9
LSM11P83369 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.083e-8■□□□□ 10.9
LSM11P83369 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.2□□□□□ -0.33e-8■□□□□ 10.9
LSM11P83369 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.66□□□□□ -0.383e-8■□□□□ 10.9
LSM11P83369 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.463e-8■□□□□ 10.9
LSM11P83369 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.21□□□□□ -0.463e-8■□□□□ 10.9
LSM11P83369 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.473e-8■□□□□ 10.9
LSM11P83369 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.523e-8■□□□□ 10.9
LSM11P83369 TJAP1-213ENST00000483640 3468 ntTSL 59.75□□□□□ -0.853e-8■□□□□ 10.9
LSM11P83369 TJAP1-210ENST00000454762 3268 ntTSL 1 (best)9.51□□□□□ -0.893e-8■□□□□ 10.9
LSM11P83369 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC8.51□□□□□ -1.053e-8■□□□□ 10.9
LSM11P83369 ABCD4-203ENST00000465085 1123 ntTSL 311□□□□□ -0.655e-8■□□□□ 10.9
LSM11P83369 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.241e-6■□□□□ 10.9
LSM11P83369 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.974e-6■□□□□ 10.9
LSM11P83369 NFE2L2-205ENST00000430047 451 ntTSL 320.7■□□□□ 0.94e-6■□□□□ 10.9
LSM11P83369 CDR2-202ENST00000561630 711 ntTSL 520.69■□□□□ 0.94e-6■□□□□ 10.9
LSM11P83369 PELP1-205ENST00000570823 484 ntTSL 419.9■□□□□ 0.784e-6■□□□□ 10.9
LSM11P83369 SNTB2-203ENST00000467311 1489 ntTSL 1 (best)19.79■□□□□ 0.764e-6■□□□□ 10.9
LSM11P83369 PELP1-207ENST00000571347 708 ntTSL 218.13■□□□□ 0.494e-6■□□□□ 10.9
LSM11P83369 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.368e-9■□□□□ 10.9
LSM11P83369 RSRC1-208ENST00000476899 788 ntTSL 517.04■□□□□ 0.324e-6■□□□□ 10.9
LSM11P83369 YPEL3-205ENST00000565110 575 ntTSL 516.83■□□□□ 0.284e-6■□□□□ 10.9
LSM11P83369 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.282e-7■□□□□ 10.9
LSM11P83369 PELP1-213ENST00000575101 442 ntTSL 316.62■□□□□ 0.254e-6■□□□□ 10.9
LSM11P83369 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.212e-7■□□□□ 10.9
LSM11P83369 YPEL3-210ENST00000568674 371 ntTSL 216.22■□□□□ 0.194e-6■□□□□ 10.9
LSM11P83369 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.114e-6■□□□□ 10.9
LSM11P83369 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.084e-6■□□□□ 10.9
LSM11P83369 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.014e-6■□□□□ 10.9
LSM11P83369 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 04e-6■□□□□ 10.9
LSM11P83369 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.83□□□□□ -0.034e-6■□□□□ 10.9
LSM11P83369 PELP1-204ENST00000570571 902 ntTSL 314.56□□□□□ -0.084e-6■□□□□ 10.9
LSM11P83369 CDR2-207ENST00000569045 826 ntTSL 514.43□□□□□ -0.14e-6■□□□□ 10.9
LSM11P83369 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.112e-7■□□□□ 10.9
LSM11P83369 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.24□□□□□ -0.134e-6■□□□□ 10.9
LSM11P83369 CBX5-206ENST00000618078 2627 ntTSL 214.23□□□□□ -0.134e-6■□□□□ 10.9
LSM11P83369 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.08□□□□□ -0.162e-7■□□□□ 10.9
LSM11P83369 SCRIB-208ENST00000546337 516 ntTSL 313.77□□□□□ -0.214e-6■□□□□ 10.9
LSM11P83369 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC13.59□□□□□ -0.234e-6■□□□□ 10.9
LSM11P83369 NFE2L2-210ENST00000462023 521 ntTSL 213.48□□□□□ -0.254e-6■□□□□ 10.9
LSM11P83369 CDR2-206ENST00000567406 567 ntTSL 413.28□□□□□ -0.284e-6■□□□□ 10.9
LSM11P83369 RSRC1-205ENST00000471911 931 ntTSL 213.25□□□□□ -0.294e-6■□□□□ 10.9
LSM11P83369 SNTB2-202ENST00000360496 415 ntTSL 213.14□□□□□ -0.314e-6■□□□□ 10.9
LSM11P83369 TMC6-214ENST00000590162 517 ntTSL 212.98□□□□□ -0.333e-16■□□□□ 10.9
LSM11P83369 SNTB2-204ENST00000524887 537 ntTSL 312.97□□□□□ -0.334e-6■□□□□ 10.9
LSM11P83369 SNTB2-205ENST00000525632 536 ntTSL 312.97□□□□□ -0.334e-6■□□□□ 10.9
LSM11P83369 NPLOC4-207ENST00000572346 567 ntTSL 412.93□□□□□ -0.344e-6■□□□□ 10.9
LSM11P83369 NPLOC4-218ENST00000574964 572 ntTSL 412.93□□□□□ -0.344e-6■□□□□ 10.9
LSM11P83369 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.93□□□□□ -0.344e-6■□□□□ 10.9
LSM11P83369 PPP2R5C-227ENST00000557268 2013 ntTSL 212.89□□□□□ -0.354e-6■□□□□ 10.9
LSM11P83369 SUPT20H-222ENST00000495071 3669 ntTSL 512.7□□□□□ -0.382e-7■□□□□ 10.9
LSM11P83369 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC12.54□□□□□ -0.44e-6■□□□□ 10.9
LSM11P83369 ZDHHC8-206ENST00000469212 625 ntTSL 312.49□□□□□ -0.414e-6■□□□□ 10.9
LSM11P83369 CDR2-204ENST00000564542 1056 ntTSL 512.35□□□□□ -0.434e-6■□□□□ 10.9
LSM11P83369 NPLOC4-210ENST00000572824 559 ntTSL 412.33□□□□□ -0.444e-6■□□□□ 10.9
LSM11P83369 NPLOC4-219ENST00000576713 571 ntTSL 512.33□□□□□ -0.444e-6■□□□□ 10.9
LSM11P83369 DHX9-203ENST00000474446 848 ntTSL 312.28□□□□□ -0.444e-6■□□□□ 10.9
LSM11P83369 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC11.57□□□□□ -0.564e-6■□□□□ 10.9
LSM11P83369 NFE2L2-213ENST00000586532 942 ntTSL 511.32□□□□□ -0.64e-6■□□□□ 10.9
LSM11P83369 NPLOC4-213ENST00000573519 654 ntTSL 1 (best)10.98□□□□□ -0.654e-6■□□□□ 10.9
LSM11P83369 RSRC1-212ENST00000482822 792 ntTSL 210.72□□□□□ -0.694e-6■□□□□ 10.9
LSM11P83369 DHX9-207ENST00000485081 2531 ntTSL 210.66□□□□□ -0.74e-6■□□□□ 10.9
LSM11P83369 RSRC1-214ENST00000496268 1039 ntTSL 310.49□□□□□ -0.734e-6■□□□□ 10.9
LSM11P83369 SUPT20H-207ENST00000469488 1313 ntTSL 510.44□□□□□ -0.742e-7■□□□□ 10.9
LSM11P83369 RSRC1-210ENST00000480119 1335 ntTSL 510.3□□□□□ -0.764e-6■□□□□ 10.9
LSM11P83369 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC10.28□□□□□ -0.764e-6■□□□□ 10.9
LSM11P83369 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC10.24□□□□□ -0.774e-6■□□□□ 10.9
LSM11P83369 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.784e-6■□□□□ 10.9
LSM11P83369 RSRC1-215ENST00000611884 1738 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.844e-6■□□□□ 10.9
LSM11P83369 NPLOC4-206ENST00000571714 676 ntTSL 59.75□□□□□ -0.854e-6■□□□□ 10.9
LSM11P83369 CDR2-203ENST00000563573 556 ntTSL 49.61□□□□□ -0.874e-6■□□□□ 10.9
LSM11P83369 PELP1-206ENST00000571170 555 ntTSL 29.56□□□□□ -0.884e-6■□□□□ 10.9
LSM11P83369 NPLOC4-211ENST00000573212 564 ntTSL 49.04□□□□□ -0.964e-6■□□□□ 10.9
LSM11P83369 RSRC1-201ENST00000295930 1727 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.994e-6■□□□□ 10.9
LSM11P83369 RSRC1-206ENST00000471994 769 ntTSL 58.7□□□□□ -1.024e-6■□□□□ 10.9
LSM11P83369 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC8.43□□□□□ -1.064e-6■□□□□ 10.9
LSM11P83369 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.32□□□□□ -1.084e-6■□□□□ 10.9
LSM11P83369 SUPT20H-217ENST00000484078 1876 ntTSL 1 (best)8.31□□□□□ -1.082e-7■□□□□ 10.9
LSM11P83369 NFE2L2-214ENST00000588123 814 ntTSL 58.28□□□□□ -1.084e-6■□□□□ 10.9
LSM11P83369 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.094e-6■□□□□ 10.9
LSM11P83369 SNTB2-206ENST00000528525 448 ntTSL 38.22□□□□□ -1.094e-6■□□□□ 10.9
LSM11P83369 SUPT20H-220ENST00000490716 3811 ntTSL 58.08□□□□□ -1.122e-7■□□□□ 10.9
LSM11P83369 PELP1-203ENST00000570387 567 ntTSL 57.93□□□□□ -1.144e-6■□□□□ 10.9
LSM11P83369 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.58□□□□□ -1.24e-6■□□□□ 10.9
LSM11P83369 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.232e-7■□□□□ 10.9
LSM11P83369 RSRC1-209ENST00000477788 755 ntTSL 36.77□□□□□ -1.334e-6■□□□□ 10.9
LSM11P83369 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.342e-7■□□□□ 10.9
LSM11P83369 UTP4-210ENST00000567287 366 ntTSL 36.47□□□□□ -1.374e-6■□□□□ 10.9
LSM11P83369 PPP2R5C-215ENST00000556068 3363 ntTSL 26.47□□□□□ -1.374e-6■□□□□ 10.9
LSM11P83369 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.394e-11■□□□□ 10.9
LSM11P83369 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.64e-6■□□□□ 10.9
LSM11P83369 MATR3-235ENST00000506147 580 ntTSL 414.27□□□□□ -0.131e-6■□□□□ 10.9
LSM11P83369 MATR3-234ENST00000505016 664 ntTSL 213.9□□□□□ -0.181e-6■□□□□ 10.9
LSM11P83369 MATR3-239ENST00000514694 587 ntTSL 413.73□□□□□ -0.211e-6■□□□□ 10.9
Retrieved 100 of 11,495 protein–RNA pairs in 77.5 ms