RNA–Protein interactions for RNA: ENST00000567287.2

UTP4-210, Transcript of UTP4, small subunit processome component, humanhuman

TSL 3

Gene UTP4, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-210ENST00000567287 NISCHQ9Y2I1 1504 aa18.51■□□□□ 0.55
UTP4-210ENST00000567287 ABCC9O60706 1549 aa16.82■□□□□ 0.28
UTP4-210ENST00000567287 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
UTP4-210ENST00000567287 DCAF8L2P0C7V8 631 aa15.89■□□□□ 0.13
UTP4-210ENST00000567287 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
UTP4-210ENST00000567287 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
UTP4-210ENST00000567287 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
UTP4-210ENST00000567287 NACADO15069 1562 aa15.68■□□□□ 0.1
UTP4-210ENST00000567287 UNC13AQ9UPW8 1703 aa15.52■□□□□ 0.08
UTP4-210ENST00000567287 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
UTP4-210ENST00000567287 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
UTP4-210ENST00000567287 ZCCHC6Q5VYS8 1495 aaKnown RBP15.32■□□□□ 0.04
UTP4-210ENST00000567287 SCRIBQ14160 1630 aa15.27■□□□□ 0.03
UTP4-210ENST00000567287 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
UTP4-210ENST00000567287 CC2D2AQ9P2K1 1620 aa15.12■□□□□ 0.01
UTP4-210ENST00000567287 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
UTP4-210ENST00000567287 EIF4G1Q04637 1599 aaKnown RBP15.05■□□□□ -0
UTP4-210ENST00000567287 SHROOM4Q9ULL8 1493 aa15.04■□□□□ -0
UTP4-210ENST00000567287 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
UTP4-210ENST00000567287 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
UTP4-210ENST00000567287 NCAPD3P42695 1498 aa14.49□□□□□ -0.09
UTP4-210ENST00000567287 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
UTP4-210ENST00000567287 SMARCA4P51532 1647 aa14.47□□□□□ -0.09
UTP4-210ENST00000567287 NESP48681 1621 aa14.44□□□□□ -0.1
UTP4-210ENST00000567287 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
UTP4-210ENST00000567287 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
UTP4-210ENST00000567287 HMGXB3Q12766 1538 aa14.37□□□□□ -0.11
UTP4-210ENST00000567287 CUX2O14529 1486 aa14.37□□□□□ -0.11
UTP4-210ENST00000567287 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
UTP4-210ENST00000567287 MROH2BQ7Z745 1585 aa14.33□□□□□ -0.12
UTP4-210ENST00000567287 PEG3Q9GZU2 1588 aa14.23□□□□□ -0.13
UTP4-210ENST00000567287 THOC2Q8NI27 1593 aaKnown RBP14.2□□□□□ -0.14
UTP4-210ENST00000567287 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
UTP4-210ENST00000567287 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
UTP4-210ENST00000567287 WIZO95785 1651 aa14.17□□□□□ -0.14
UTP4-210ENST00000567287 PDS5BQ9NTI5 1447 aa14.13□□□□□ -0.15
UTP4-210ENST00000567287 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
UTP4-210ENST00000567287 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
UTP4-210ENST00000567287 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
UTP4-210ENST00000567287 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
UTP4-210ENST00000567287 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
UTP4-210ENST00000567287 WDR62O43379 1518 aa13.97□□□□□ -0.17
UTP4-210ENST00000567287 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
UTP4-210ENST00000567287 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
UTP4-210ENST00000567287 CFTRP13569 1480 aa13.9□□□□□ -0.18
UTP4-210ENST00000567287 URB2Q14146 1524 aaKnown RBP13.87□□□□□ -0.19
UTP4-210ENST00000567287 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
UTP4-210ENST00000567287 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
UTP4-210ENST00000567287 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
UTP4-210ENST00000567287 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
UTP4-210ENST00000567287 TOPBP1Q92547 1522 aa13.69□□□□□ -0.22
UTP4-210ENST00000567287 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
UTP4-210ENST00000567287 FBLN2P98095 1184 aa13.63□□□□□ -0.23
UTP4-210ENST00000567287 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
UTP4-210ENST00000567287 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■■■■■ 35.2
UTP4-210ENST00000567287 RIMBP3CA6NJZ7 1639 aa13.62□□□□□ -0.23
UTP4-210ENST00000567287 RIMBP3BA6NNM3 1639 aa13.62□□□□□ -0.23
UTP4-210ENST00000567287 RIMBP3Q9UFD9 1639 aa13.62□□□□□ -0.23
UTP4-210ENST00000567287 DNMBPQ6XZF7 1577 aa13.61□□□□□ -0.23
UTP4-210ENST00000567287 RAD54L2Q9Y4B4 1467 aa13.58□□□□□ -0.24
UTP4-210ENST00000567287 ARHGEF11O15085 1522 aa13.56□□□□□ -0.24
UTP4-210ENST00000567287 ABCC8Q09428 1581 aa13.56□□□□□ -0.24
UTP4-210ENST00000567287 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
UTP4-210ENST00000567287 CHD1O14646 1710 aa13.55□□□□□ -0.24
UTP4-210ENST00000567287 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
UTP4-210ENST00000567287 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
UTP4-210ENST00000567287 TARBP1Q13395 1621 aaKnown RBP13.54□□□□□ -0.24
UTP4-210ENST00000567287 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
UTP4-210ENST00000567287 SOGA1O94964 1423 aa13.5□□□□□ -0.25
UTP4-210ENST00000567287 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
UTP4-210ENST00000567287 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.25
UTP4-210ENST00000567287 CUX1P39880 1505 aa13.45□□□□□ -0.26
UTP4-210ENST00000567287 TRHP20396 242 aaPredicted RBP13.45□□□□□ -0.26
UTP4-210ENST00000567287 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
UTP4-210ENST00000567287 CHMP7Q8WUX9 453 aaPredicted RBP13.42□□□□□ -0.26
UTP4-210ENST00000567287 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
UTP4-210ENST00000567287 CLASP1Q7Z460 1538 aa13.34□□□□□ -0.27
UTP4-210ENST00000567287 GAPVD1Q14C86 1478 aa13.33□□□□□ -0.28
UTP4-210ENST00000567287 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
UTP4-210ENST00000567287 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
UTP4-210ENST00000567287 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
UTP4-210ENST00000567287 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
UTP4-210ENST00000567287 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
UTP4-210ENST00000567287 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
UTP4-210ENST00000567287 ABCA5Q8WWZ7 1642 aa13.25□□□□□ -0.29
UTP4-210ENST00000567287 ERCC6L2Q5T890 1561 aa13.23□□□□□ -0.29
UTP4-210ENST00000567287 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
UTP4-210ENST00000567287 GRIN2AQ12879 1464 aa13.2□□□□□ -0.3
UTP4-210ENST00000567287 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
UTP4-210ENST00000567287 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
UTP4-210ENST00000567287 TOP2BQ02880 1626 aa13.17□□□□□ -0.3
UTP4-210ENST00000567287 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
UTP4-210ENST00000567287 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
UTP4-210ENST00000567287 NUP160Q12769 1436 aa13.12□□□□□ -0.31
UTP4-210ENST00000567287 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
UTP4-210ENST00000567287 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
UTP4-210ENST00000567287 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
UTP4-210ENST00000567287 TTBK1Q5TCY1 1321 aaPredicted RBP13.06□□□□□ -0.32
UTP4-210ENST00000567287 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
UTP4-210ENST00000567287 JPH4Q96JJ6 628 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms