RNA–Protein interactions for RNA: ENST00000524887.5

SNTB2-204, Transcript of syntrophin beta 2, humanhuman

TSL 3

Gene SNTB2, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB2-204ENST00000524887 NISCHQ9Y2I1 1504 aa37.6■■■■□ 3.61
SNTB2-204ENST00000524887 ABCC9O60706 1549 aa33.84■■■■□ 3.01
SNTB2-204ENST00000524887 CCDC180Q9P1Z9 1646 aa33.77■■■■□ 3
SNTB2-204ENST00000524887 RB1CC1Q8TDY2 1594 aa32.13■■■□□ 2.73
SNTB2-204ENST00000524887 NACADO15069 1562 aa31.9■■■□□ 2.7
SNTB2-204ENST00000524887 DNAJC5BQ9UF47 199 aa31.82■■■□□ 2.68
SNTB2-204ENST00000524887 DCAF8L2P0C7V8 631 aa31.69■■■□□ 2.66
SNTB2-204ENST00000524887 UNC13AQ9UPW8 1703 aa31.56■■■□□ 2.64
SNTB2-204ENST00000524887 PABPN1Q86U42 306 aaKnown RBP eCLIP31.48■■■□□ 2.63
SNTB2-204ENST00000524887 MYO15BQ96JP2 1530 aa31.42■■■□□ 2.62
SNTB2-204ENST00000524887 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
SNTB2-204ENST00000524887 ZCCHC6Q5VYS8 1495 aaKnown RBP31.16■■■□□ 2.58
SNTB2-204ENST00000524887 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
SNTB2-204ENST00000524887 SCRIBQ14160 1630 aa30.81■■■□□ 2.52
SNTB2-204ENST00000524887 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
SNTB2-204ENST00000524887 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
SNTB2-204ENST00000524887 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
SNTB2-204ENST00000524887 CECR2Q9BXF3 1484 aa30.45■■■□□ 2.47
SNTB2-204ENST00000524887 NCAPD3P42695 1498 aa29.44■■■□□ 2.3
SNTB2-204ENST00000524887 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
SNTB2-204ENST00000524887 SMARCA4P51532 1647 aa29.37■■■□□ 2.29
SNTB2-204ENST00000524887 SMARCA2P51531 1590 aa29.26■■■□□ 2.27
SNTB2-204ENST00000524887 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
SNTB2-204ENST00000524887 DNAJC5Q9H3Z4 198 aa29.16■■■□□ 2.26
SNTB2-204ENST00000524887 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
SNTB2-204ENST00000524887 ERCC6Q03468 1493 aa29.16■■■□□ 2.26
SNTB2-204ENST00000524887 CUX2O14529 1486 aa29.12■■■□□ 2.25
SNTB2-204ENST00000524887 NESP48681 1621 aa29.09■■■□□ 2.25
SNTB2-204ENST00000524887 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
SNTB2-204ENST00000524887 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
SNTB2-204ENST00000524887 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.24
SNTB2-204ENST00000524887 THOC2Q8NI27 1593 aaKnown RBP28.8■■■□□ 2.2
SNTB2-204ENST00000524887 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
SNTB2-204ENST00000524887 KIF21AQ7Z4S6 1674 aa28.74■■■□□ 2.19
SNTB2-204ENST00000524887 WIZO95785 1651 aa28.68■■■□□ 2.18
SNTB2-204ENST00000524887 PDS5BQ9NTI5 1447 aa28.59■■■□□ 2.17
SNTB2-204ENST00000524887 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
SNTB2-204ENST00000524887 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
SNTB2-204ENST00000524887 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
SNTB2-204ENST00000524887 WDR62O43379 1518 aa28.35■■■□□ 2.13
SNTB2-204ENST00000524887 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
SNTB2-204ENST00000524887 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
SNTB2-204ENST00000524887 FANCD2Q9BXW9 1451 aa28.25■■■□□ 2.11
SNTB2-204ENST00000524887 CFTRP13569 1480 aa28.22■■■□□ 2.11
SNTB2-204ENST00000524887 URB2Q14146 1524 aaKnown RBP28.07■■■□□ 2.08
SNTB2-204ENST00000524887 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
SNTB2-204ENST00000524887 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.06
SNTB2-204ENST00000524887 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
SNTB2-204ENST00000524887 OSCARQ8IYS5 282 aa27.74■■■□□ 2.03
SNTB2-204ENST00000524887 ZNF608Q9ULD9 1512 aaPredicted RBP27.73■■■□□ 2.03
SNTB2-204ENST00000524887 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
SNTB2-204ENST00000524887 IFT140Q96RY7 1462 aa27.7■■■□□ 2.02
SNTB2-204ENST00000524887 DNMBPQ6XZF7 1577 aa27.61■■■□□ 2.01
SNTB2-204ENST00000524887 EIF4G3O43432 1585 aaKnown RBP27.57■■■□□ 2
SNTB2-204ENST00000524887 ABCC8Q09428 1581 aa27.56■■■□□ 2
SNTB2-204ENST00000524887 RIMBP3CA6NJZ7 1639 aa27.52■■■□□ 2
SNTB2-204ENST00000524887 RIMBP3BA6NNM3 1639 aa27.52■■■□□ 2
SNTB2-204ENST00000524887 RIMBP3Q9UFD9 1639 aa27.52■■■□□ 2
SNTB2-204ENST00000524887 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
SNTB2-204ENST00000524887 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
SNTB2-204ENST00000524887 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
SNTB2-204ENST00000524887 CHD1O14646 1710 aa27.41■■□□□ 1.98
SNTB2-204ENST00000524887 ARHGEF11O15085 1522 aa27.39■■□□□ 1.98
SNTB2-204ENST00000524887 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
SNTB2-204ENST00000524887 CUX1P39880 1505 aa27.26■■□□□ 1.96
SNTB2-204ENST00000524887 FGD5Q6ZNL6 1462 aa27.26■■□□□ 1.95
SNTB2-204ENST00000524887 SOGA1O94964 1423 aa27.26■■□□□ 1.95
SNTB2-204ENST00000524887 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
SNTB2-204ENST00000524887 FBLN2P98095 1184 aa27.21■■□□□ 1.95
SNTB2-204ENST00000524887 SNAPC4Q5SXM2 1469 aa27.17■■□□□ 1.94
SNTB2-204ENST00000524887 WDR97A6NE52 1622 aa27.15■■□□□ 1.94
SNTB2-204ENST00000524887 ARAP1Q96P48 1450 aa27.14■■□□□ 1.94
SNTB2-204ENST00000524887 CYB5RLQ6IPT4 315 aa27.13■■□□□ 1.93
SNTB2-204ENST00000524887 CLASP1Q7Z460 1538 aa27.06■■□□□ 1.92
SNTB2-204ENST00000524887 MAGI1Q96QZ7 1491 aaPredicted RBP27.05■■□□□ 1.92
SNTB2-204ENST00000524887 GRIN2BQ13224 1484 aa27.04■■□□□ 1.92
SNTB2-204ENST00000524887 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
SNTB2-204ENST00000524887 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
SNTB2-204ENST00000524887 SYNJ1O43426 1573 aa26.98■■□□□ 1.91
SNTB2-204ENST00000524887 CHMP7Q8WUX9 453 aaPredicted RBP26.98■■□□□ 1.91
SNTB2-204ENST00000524887 SYNJ2O15056 1496 aa26.96■■□□□ 1.91
SNTB2-204ENST00000524887 GAPVD1Q14C86 1478 aa26.95■■□□□ 1.91
SNTB2-204ENST00000524887 ABCA5Q8WWZ7 1642 aa26.94■■□□□ 1.9
SNTB2-204ENST00000524887 ABCA10Q8WWZ4 1543 aa26.93■■□□□ 1.9
SNTB2-204ENST00000524887 TRHP20396 242 aaPredicted RBP26.82■■□□□ 1.88
SNTB2-204ENST00000524887 BIVM-ERCC5R4GMW8 1640 aa26.8■■□□□ 1.88
SNTB2-204ENST00000524887 TOP2BQ02880 1626 aa26.78■■□□□ 1.88
SNTB2-204ENST00000524887 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
SNTB2-204ENST00000524887 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
SNTB2-204ENST00000524887 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
SNTB2-204ENST00000524887 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
SNTB2-204ENST00000524887 CEP170Q5SW79 1584 aa26.67■■□□□ 1.86
SNTB2-204ENST00000524887 NUP160Q12769 1436 aa26.64■■□□□ 1.85
SNTB2-204ENST00000524887 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
SNTB2-204ENST00000524887 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
SNTB2-204ENST00000524887 SHROOM2Q13796 1616 aa26.56■■□□□ 1.84
SNTB2-204ENST00000524887 RUSC2Q8N2Y8 1516 aa26.37■■□□□ 1.81
SNTB2-204ENST00000524887 PRG4Q92954 1404 aaPredicted RBP26.36■■□□□ 1.81
SNTB2-204ENST00000524887 JPH4Q96JJ6 628 aa26.31■■□□□ 1.8
SNTB2-204ENST00000524887 KIF13AQ9H1H9 1805 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms