RNA–Protein interactions for RNA: ENST00000542180.5

SUPT20H-224, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SUPT20H, Length 2,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-224ENST00000542180 CHIC1Q5VXU3 224 aa15□□□□□ -0.01
SUPT20H-224ENST00000542180 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
SUPT20H-224ENST00000542180 PHF23Q9BUL5 403 aaPredicted RBP13.45□□□□□ -0.26
SUPT20H-224ENST00000542180 PLPPR3Q6T4P5 718 aa12.52□□□□□ -0.41
SUPT20H-224ENST00000542180 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
SUPT20H-224ENST00000542180 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
SUPT20H-224ENST00000542180 HRCP23327 699 aa12.35□□□□□ -0.43
SUPT20H-224ENST00000542180 NISCHQ9Y2I1 1504 aa12.29□□□□□ -0.44
SUPT20H-224ENST00000542180 PPARGC1BQ86YN6 1023 aaKnown RBP12.13□□□□□ -0.47
SUPT20H-224ENST00000542180 MYT1Q01538 1121 aa12.12□□□□□ -0.47
SUPT20H-224ENST00000542180 KCNA4P22459 653 aa12.11□□□□□ -0.47
SUPT20H-224ENST00000542180 SENP3Q9H4L4 574 aaPredicted RBP12.04□□□□□ -0.48
SUPT20H-224ENST00000542180 ADRA2BP18089 450 aa11.96□□□□□ -0.49
SUPT20H-224ENST00000542180 PCGF6Q9BYE7 350 aa11.94□□□□□ -0.5
SUPT20H-224ENST00000542180 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
SUPT20H-224ENST00000542180 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
SUPT20H-224ENST00000542180 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
SUPT20H-224ENST00000542180 PPP6R1Q9UPN7 881 aa11.62□□□□□ -0.55
SUPT20H-224ENST00000542180 MYO15BQ96JP2 1530 aa11.6□□□□□ -0.55
SUPT20H-224ENST00000542180 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
SUPT20H-224ENST00000542180 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
SUPT20H-224ENST00000542180 ACIN1Q9UKV3 1341 aaKnown RBP11.5□□□□□ -0.57
SUPT20H-224ENST00000542180 TTBK1Q5TCY1 1321 aaPredicted RBP11.47□□□□□ -0.57
SUPT20H-224ENST00000542180 NEUROD1Q13562 356 aa11.46□□□□□ -0.57
SUPT20H-224ENST00000542180 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
SUPT20H-224ENST00000542180 ZEB1P37275 1124 aaPredicted RBP11.43□□□□□ -0.58
SUPT20H-224ENST00000542180 TRIM26Q12899 539 aaPredicted RBP11.4□□□□□ -0.58
SUPT20H-224ENST00000542180 DCAF1Q9Y4B6 1507 aa11.38□□□□□ -0.59
SUPT20H-224ENST00000542180 SHROOM4Q9ULL8 1493 aa11.37□□□□□ -0.59
SUPT20H-224ENST00000542180 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
SUPT20H-224ENST00000542180 BCL11AQ9H165 835 aa11.34□□□□□ -0.59
SUPT20H-224ENST00000542180 CENPBP07199 599 aaPredicted RBP11.3□□□□□ -0.6
SUPT20H-224ENST00000542180 CCDC180Q9P1Z9 1646 aa11.3□□□□□ -0.6
SUPT20H-224ENST00000542180 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
SUPT20H-224ENST00000542180 LOC105371045A0A1W2PR82 267 aa11.24□□□□□ -0.61
SUPT20H-224ENST00000542180 ZBTB22O15209 634 aa11.24□□□□□ -0.61
SUPT20H-224ENST00000542180 FOXD1Q16676 465 aa11.23□□□□□ -0.61
SUPT20H-224ENST00000542180 PPP4R3CPQ6ZMV5 832 aa11.22□□□□□ -0.61
SUPT20H-224ENST00000542180 PRKCSHP14314 528 aaPredicted RBP11.19□□□□□ -0.62
SUPT20H-224ENST00000542180 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
SUPT20H-224ENST00000542180 DIEXFQ68CQ4 756 aaKnown RBP11.1□□□□□ -0.63
SUPT20H-224ENST00000542180 NPM3O75607 178 aaKnown RBP11.08□□□□□ -0.64
SUPT20H-224ENST00000542180 ANP32EQ9BTT0 268 aa11.07□□□□□ -0.64
SUPT20H-224ENST00000542180 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
SUPT20H-224ENST00000542180 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
SUPT20H-224ENST00000542180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
SUPT20H-224ENST00000542180 CCER1Q8TC90 406 aaPredicted RBP10.91□□□□□ -0.66
SUPT20H-224ENST00000542180 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
SUPT20H-224ENST00000542180 TSHZ2Q9NRE2 1034 aa10.85□□□□□ -0.67
SUPT20H-224ENST00000542180 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
SUPT20H-224ENST00000542180 APLP2Q06481 763 aa10.78□□□□□ -0.68
SUPT20H-224ENST00000542180 SUPT16HQ9Y5B9 1047 aaKnown RBP10.78□□□□□ -0.68
SUPT20H-224ENST00000542180 MIER1Q8N108 512 aa10.78□□□□□ -0.68
SUPT20H-224ENST00000542180 ZNF316A6NFI3 1004 aaPredicted RBP10.77□□□□□ -0.69
SUPT20H-224ENST00000542180 PIAS4Q8N2W9 510 aaPredicted RBP10.77□□□□□ -0.69
SUPT20H-224ENST00000542180 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
SUPT20H-224ENST00000542180 CLSPNQ9HAW4 1339 aa10.68□□□□□ -0.7
SUPT20H-224ENST00000542180 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
SUPT20H-224ENST00000542180 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
SUPT20H-224ENST00000542180 FKBP8Q14318 412 aa10.6□□□□□ -0.71
SUPT20H-224ENST00000542180 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
SUPT20H-224ENST00000542180 BCANQ96GW7 911 aa10.55□□□□□ -0.72
SUPT20H-224ENST00000542180 ZCCHC6Q5VYS8 1495 aaKnown RBP10.51□□□□□ -0.73
SUPT20H-224ENST00000542180 MSH5O43196 834 aa10.5□□□□□ -0.73
SUPT20H-224ENST00000542180 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.74
SUPT20H-224ENST00000542180 DEKP35659 375 aaKnown RBP10.45□□□□□ -0.74
SUPT20H-224ENST00000542180 CCDC136Q96JN2 1154 aa10.43□□□□□ -0.74
SUPT20H-224ENST00000542180 DNAJC5BQ9UF47 199 aa10.4□□□□□ -0.74
SUPT20H-224ENST00000542180 MYT1LQ9UL68 1186 aa10.39□□□□□ -0.75
SUPT20H-224ENST00000542180 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
SUPT20H-224ENST00000542180 UBE2Q2Q8WVN8 375 aa10.39□□□□□ -0.75
SUPT20H-224ENST00000542180 ITGAEP38570 1179 aa10.38□□□□□ -0.75
SUPT20H-224ENST00000542180 FANCIQ9NVI1 1328 aa10.34□□□□□ -0.75
SUPT20H-224ENST00000542180 MAPK8IP2Q13387 824 aaPredicted RBP10.32□□□□□ -0.76
SUPT20H-224ENST00000542180 ERICH6BQ5W0A0 696 aa10.32□□□□□ -0.76
SUPT20H-224ENST00000542180 NEFLP07196 543 aa10.31□□□□□ -0.76
SUPT20H-224ENST00000542180 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.3□□□□□ -0.76
SUPT20H-224ENST00000542180 KCNH8Q96L42 1107 aa10.3□□□□□ -0.76
SUPT20H-224ENST00000542180 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
SUPT20H-224ENST00000542180 PLCB2Q00722 1185 aa10.29□□□□□ -0.76
SUPT20H-224ENST00000542180 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
SUPT20H-224ENST00000542180 NBR1Q14596 966 aa10.25□□□□□ -0.77
SUPT20H-224ENST00000542180 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
SUPT20H-224ENST00000542180 CDK11AQ9UQ88 783 aaPredicted RBP10.22□□□□□ -0.77
SUPT20H-224ENST00000542180 WRNQ14191 1432 aaPredicted RBP eCLIP10.21□□□□□ -0.78
SUPT20H-224ENST00000542180 EIF5BO60841 1220 aaKnown RBP10.21□□□□□ -0.78
SUPT20H-224ENST00000542180 RNF216Q9NWF9 866 aaPredicted RBP10.19□□□□□ -0.78
SUPT20H-224ENST00000542180 TAOK2Q9UL54 1235 aa10.17□□□□□ -0.78
SUPT20H-224ENST00000542180 HAP1P54257 671 aaPredicted RBP10.16□□□□□ -0.78
SUPT20H-224ENST00000542180 ATXN8OSP0DMR3 200 aa10.16□□□□□ -0.78
SUPT20H-224ENST00000542180 PKNOX2Q96KN3 472 aa10.15□□□□□ -0.78
SUPT20H-224ENST00000542180 NOP58Q9Y2X3 529 aaKnown RBP10.14□□□□□ -0.79
SUPT20H-224ENST00000542180 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
SUPT20H-224ENST00000542180 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
SUPT20H-224ENST00000542180 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
SUPT20H-224ENST00000542180 RTL5Q5HYW3 569 aaPredicted RBP10.11□□□□□ -0.79
SUPT20H-224ENST00000542180 RB1CC1Q8TDY2 1594 aa10.1□□□□□ -0.79
SUPT20H-224ENST00000542180 IRX6P78412 446 aaPredicted RBP10.1□□□□□ -0.79
SUPT20H-224ENST00000542180 RSF1Q96T23 1441 aaPredicted RBP10.09□□□□□ -0.79
SUPT20H-224ENST00000542180 MYCNP04198 464 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms