RNA–Protein interactions for RNA: ENST00000528525.1

SNTB2-206, Transcript of syntrophin beta 2, humanhuman

TSL 3

Gene SNTB2, Length 448 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB2-206ENST00000528525 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
SNTB2-206ENST00000528525 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
SNTB2-206ENST00000528525 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
SNTB2-206ENST00000528525 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
SNTB2-206ENST00000528525 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
SNTB2-206ENST00000528525 CCDC180Q9P1Z9 1646 aa15.76■□□□□ 0.11
SNTB2-206ENST00000528525 FOXD1Q16676 465 aa15.64■□□□□ 0.09
SNTB2-206ENST00000528525 ABCC9O60706 1549 aa15.42■□□□□ 0.06
SNTB2-206ENST00000528525 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
SNTB2-206ENST00000528525 POTEDQ86YR6 584 aa14.94□□□□□ -0.02
SNTB2-206ENST00000528525 RB1CC1Q8TDY2 1594 aa14.85□□□□□ -0.03
SNTB2-206ENST00000528525 NACADO15069 1562 aa14.82□□□□□ -0.04
SNTB2-206ENST00000528525 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
SNTB2-206ENST00000528525 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.06
SNTB2-206ENST00000528525 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
SNTB2-206ENST00000528525 MSH5O43196 834 aa14.6□□□□□ -0.07
SNTB2-206ENST00000528525 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
SNTB2-206ENST00000528525 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
SNTB2-206ENST00000528525 PPP6R1Q9UPN7 881 aa14.44□□□□□ -0.1
SNTB2-206ENST00000528525 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
SNTB2-206ENST00000528525 SCRIBQ14160 1630 aa14.39□□□□□ -0.11
SNTB2-206ENST00000528525 ADRA2BP18089 450 aa14.35□□□□□ -0.11
SNTB2-206ENST00000528525 PLPPR3Q6T4P5 718 aa14.32□□□□□ -0.12
SNTB2-206ENST00000528525 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
SNTB2-206ENST00000528525 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
SNTB2-206ENST00000528525 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
SNTB2-206ENST00000528525 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
SNTB2-206ENST00000528525 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
SNTB2-206ENST00000528525 CECR2Q9BXF3 1484 aa13.86□□□□□ -0.19
SNTB2-206ENST00000528525 BAZ1AQ9NRL2 1556 aaPredicted RBP13.77□□□□□ -0.21
SNTB2-206ENST00000528525 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
SNTB2-206ENST00000528525 SMARCA2P51531 1590 aa13.69□□□□□ -0.22
SNTB2-206ENST00000528525 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
SNTB2-206ENST00000528525 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
SNTB2-206ENST00000528525 MROH2BQ7Z745 1585 aa13.65□□□□□ -0.22
SNTB2-206ENST00000528525 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
SNTB2-206ENST00000528525 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
SNTB2-206ENST00000528525 PEG3Q9GZU2 1588 aa13.59□□□□□ -0.23
SNTB2-206ENST00000528525 WIZO95785 1651 aa13.51□□□□□ -0.25
SNTB2-206ENST00000528525 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
SNTB2-206ENST00000528525 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
SNTB2-206ENST00000528525 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
SNTB2-206ENST00000528525 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
SNTB2-206ENST00000528525 NESP48681 1621 aa13.31□□□□□ -0.28
SNTB2-206ENST00000528525 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
SNTB2-206ENST00000528525 CADPSQ9ULU8 1353 aa13.3□□□□□ -0.28
SNTB2-206ENST00000528525 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
SNTB2-206ENST00000528525 PDS5BQ9NTI5 1447 aa13.28□□□□□ -0.28
SNTB2-206ENST00000528525 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
SNTB2-206ENST00000528525 CFTRP13569 1480 aa13.19□□□□□ -0.3
SNTB2-206ENST00000528525 KIF21AQ7Z4S6 1674 aa13.16□□□□□ -0.3
SNTB2-206ENST00000528525 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
SNTB2-206ENST00000528525 CUX2O14529 1486 aa13.15□□□□□ -0.3
SNTB2-206ENST00000528525 FANCD2Q9BXW9 1451 aa13.14□□□□□ -0.31
SNTB2-206ENST00000528525 CEP164Q9UPV0 1460 aa13.14□□□□□ -0.31
SNTB2-206ENST00000528525 THOC2Q8NI27 1593 aaKnown RBP13.1□□□□□ -0.31
SNTB2-206ENST00000528525 MRC2Q9UBG0 1479 aa13.1□□□□□ -0.31
SNTB2-206ENST00000528525 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
SNTB2-206ENST00000528525 WDR62O43379 1518 aa13.03□□□□□ -0.32
SNTB2-206ENST00000528525 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
SNTB2-206ENST00000528525 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
SNTB2-206ENST00000528525 TOPBP1Q92547 1522 aa12.91□□□□□ -0.34
SNTB2-206ENST00000528525 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.34
SNTB2-206ENST00000528525 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
SNTB2-206ENST00000528525 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
SNTB2-206ENST00000528525 POLA1P09884 1462 aaPredicted RBP12.8□□□□□ -0.36
SNTB2-206ENST00000528525 CUX1P39880 1505 aa12.8□□□□□ -0.36
SNTB2-206ENST00000528525 SOGA1O94964 1423 aa12.79□□□□□ -0.36
SNTB2-206ENST00000528525 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
SNTB2-206ENST00000528525 CACNB1Q02641 598 aaPredicted RBP12.78□□□□□ -0.36
SNTB2-206ENST00000528525 WRNQ14191 1432 aaPredicted RBP eCLIP12.78□□□□□ -0.36
SNTB2-206ENST00000528525 ZNF608Q9ULD9 1512 aaPredicted RBP12.75□□□□□ -0.37
SNTB2-206ENST00000528525 RAD54L2Q9Y4B4 1467 aa12.75□□□□□ -0.37
SNTB2-206ENST00000528525 TARBP1Q13395 1621 aaKnown RBP12.74□□□□□ -0.37
SNTB2-206ENST00000528525 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
SNTB2-206ENST00000528525 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
SNTB2-206ENST00000528525 EIF4G3O43432 1585 aaKnown RBP12.72□□□□□ -0.37
SNTB2-206ENST00000528525 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNTB2-206ENST00000528525 TDRD9Q8NDG6 1382 aaKnown RBP12.7□□□□□ -0.38
SNTB2-206ENST00000528525 BIVM-ERCC5R4GMW8 1640 aa12.7□□□□□ -0.38
SNTB2-206ENST00000528525 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
SNTB2-206ENST00000528525 WDR97A6NE52 1622 aa12.69□□□□□ -0.38
SNTB2-206ENST00000528525 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
SNTB2-206ENST00000528525 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
SNTB2-206ENST00000528525 ABCA10Q8WWZ4 1543 aa12.66□□□□□ -0.38
SNTB2-206ENST00000528525 FBLN2P98095 1184 aa12.65□□□□□ -0.38
SNTB2-206ENST00000528525 GAPVD1Q14C86 1478 aa12.64□□□□□ -0.39
SNTB2-206ENST00000528525 GRIN2BQ13224 1484 aa12.63□□□□□ -0.39
SNTB2-206ENST00000528525 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
SNTB2-206ENST00000528525 CHMP7Q8WUX9 453 aaPredicted RBP12.6□□□□□ -0.39
SNTB2-206ENST00000528525 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
SNTB2-206ENST00000528525 MAGI1Q96QZ7 1491 aaPredicted RBP12.59□□□□□ -0.39
SNTB2-206ENST00000528525 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
SNTB2-206ENST00000528525 PBRM1Q86U86 1689 aa12.58□□□□□ -0.4
SNTB2-206ENST00000528525 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
SNTB2-206ENST00000528525 CHD1O14646 1710 aa12.54□□□□□ -0.4
SNTB2-206ENST00000528525 SYNJ2O15056 1496 aa12.54□□□□□ -0.4
SNTB2-206ENST00000528525 HOXD11P31277 338 aaPredicted RBP12.54□□□□□ -0.4
SNTB2-206ENST00000528525 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
SNTB2-206ENST00000528525 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms