RNA–Protein interactions for RNA: ENST00000484078.5

SUPT20H-217, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 1,876 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-217ENST00000484078 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
SUPT20H-217ENST00000484078 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
SUPT20H-217ENST00000484078 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
SUPT20H-217ENST00000484078 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
SUPT20H-217ENST00000484078 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
SUPT20H-217ENST00000484078 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
SUPT20H-217ENST00000484078 FOXD1Q16676 465 aa15.15■□□□□ 0.02
SUPT20H-217ENST00000484078 ADRA2BP18089 450 aa14.83□□□□□ -0.04
SUPT20H-217ENST00000484078 PPP6R1Q9UPN7 881 aa14.72□□□□□ -0.05
SUPT20H-217ENST00000484078 MSH5O43196 834 aa14.68□□□□□ -0.06
SUPT20H-217ENST00000484078 KCNA4P22459 653 aa14.36□□□□□ -0.11
SUPT20H-217ENST00000484078 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
SUPT20H-217ENST00000484078 PIAS4Q8N2W9 510 aaPredicted RBP14.04□□□□□ -0.16
SUPT20H-217ENST00000484078 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
SUPT20H-217ENST00000484078 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
SUPT20H-217ENST00000484078 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
SUPT20H-217ENST00000484078 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
SUPT20H-217ENST00000484078 NCBP3Q53F19 620 aaKnown RBP13.5□□□□□ -0.25
SUPT20H-217ENST00000484078 ZBTB22O15209 634 aa13.31□□□□□ -0.28
SUPT20H-217ENST00000484078 CNKSR2Q8WXI2 1034 aa13.26□□□□□ -0.29
SUPT20H-217ENST00000484078 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.3
SUPT20H-217ENST00000484078 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
SUPT20H-217ENST00000484078 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
SUPT20H-217ENST00000484078 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
SUPT20H-217ENST00000484078 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
SUPT20H-217ENST00000484078 DNAJC5BQ9UF47 199 aa12.87□□□□□ -0.35
SUPT20H-217ENST00000484078 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
SUPT20H-217ENST00000484078 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
SUPT20H-217ENST00000484078 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
SUPT20H-217ENST00000484078 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
SUPT20H-217ENST00000484078 POTEHQ6S545 545 aa12.47□□□□□ -0.41
SUPT20H-217ENST00000484078 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
SUPT20H-217ENST00000484078 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
SUPT20H-217ENST00000484078 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
SUPT20H-217ENST00000484078 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
SUPT20H-217ENST00000484078 FKBP8Q14318 412 aa12.25□□□□□ -0.45
SUPT20H-217ENST00000484078 ATF5Q9Y2D1 282 aaPredicted RBP12.24□□□□□ -0.45
SUPT20H-217ENST00000484078 DCAF8L1A6NGE4 600 aa12.2□□□□□ -0.46
SUPT20H-217ENST00000484078 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
SUPT20H-217ENST00000484078 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
SUPT20H-217ENST00000484078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.05□□□□□ -0.48
SUPT20H-217ENST00000484078 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
SUPT20H-217ENST00000484078 SLC24A1O60721 1099 aa12.02□□□□□ -0.49
SUPT20H-217ENST00000484078 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
SUPT20H-217ENST00000484078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
SUPT20H-217ENST00000484078 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
SUPT20H-217ENST00000484078 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
SUPT20H-217ENST00000484078 CCDC180Q9P1Z9 1646 aa11.72□□□□□ -0.53
SUPT20H-217ENST00000484078 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
SUPT20H-217ENST00000484078 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
SUPT20H-217ENST00000484078 SPDYE4A6NLX3 237 aa11.59□□□□□ -0.55
SUPT20H-217ENST00000484078 TRHP20396 242 aaPredicted RBP11.51□□□□□ -0.57
SUPT20H-217ENST00000484078 PROM2Q8N271 834 aa11.51□□□□□ -0.57
SUPT20H-217ENST00000484078 ABCC9O60706 1549 aa11.48□□□□□ -0.57
SUPT20H-217ENST00000484078 APLP2Q06481 763 aa11.46□□□□□ -0.57
SUPT20H-217ENST00000484078 POLA2Q14181 598 aa11.46□□□□□ -0.57
SUPT20H-217ENST00000484078 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
SUPT20H-217ENST00000484078 VASPP50552 380 aaPredicted RBP11.42□□□□□ -0.58
SUPT20H-217ENST00000484078 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
SUPT20H-217ENST00000484078 CAPN15O75808 1086 aa11.38□□□□□ -0.59
SUPT20H-217ENST00000484078 FBLN2P98095 1184 aa11.36□□□□□ -0.59
SUPT20H-217ENST00000484078 ABCB7O75027 752 aa11.32□□□□□ -0.6
SUPT20H-217ENST00000484078 DSG3P32926 999 aa11.29□□□□□ -0.6
SUPT20H-217ENST00000484078 PKD2Q13563 968 aa11.27□□□□□ -0.61
SUPT20H-217ENST00000484078 PLCB2Q00722 1185 aa11.25□□□□□ -0.61
SUPT20H-217ENST00000484078 DCAF8L2P0C7V8 631 aa11.18□□□□□ -0.62
SUPT20H-217ENST00000484078 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
SUPT20H-217ENST00000484078 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
SUPT20H-217ENST00000484078 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
SUPT20H-217ENST00000484078 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
SUPT20H-217ENST00000484078 ZNF692Q9BU19 519 aaPredicted RBP11.06□□□□□ -0.64
SUPT20H-217ENST00000484078 RB1CC1Q8TDY2 1594 aa11.04□□□□□ -0.64
SUPT20H-217ENST00000484078 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
SUPT20H-217ENST00000484078 NACADO15069 1562 aa11.03□□□□□ -0.64
SUPT20H-217ENST00000484078 KLHL34Q8N239 644 aa11.02□□□□□ -0.64
SUPT20H-217ENST00000484078 SSUH2Q9Y2M2 353 aa11.01□□□□□ -0.65
SUPT20H-217ENST00000484078 SPOCK2Q92563 424 aa11□□□□□ -0.65
SUPT20H-217ENST00000484078 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
SUPT20H-217ENST00000484078 ECM2O94769 699 aaPredicted RBP10.98□□□□□ -0.65
SUPT20H-217ENST00000484078 RBM42Q9BTD8 480 aaKnown RBP10.97□□□□□ -0.65
SUPT20H-217ENST00000484078 RGL2O15211 777 aa10.96□□□□□ -0.65
SUPT20H-217ENST00000484078 ZCCHC6Q5VYS8 1495 aaKnown RBP10.96□□□□□ -0.66
SUPT20H-217ENST00000484078 MYO15BQ96JP2 1530 aa10.94□□□□□ -0.66
SUPT20H-217ENST00000484078 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
SUPT20H-217ENST00000484078 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
SUPT20H-217ENST00000484078 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
SUPT20H-217ENST00000484078 PLCD3Q8N3E9 789 aa10.93□□□□□ -0.66
SUPT20H-217ENST00000484078 DNAJC5Q9H3Z4 198 aa10.92□□□□□ -0.66
SUPT20H-217ENST00000484078 KDM2AQ9Y2K7 1162 aa10.92□□□□□ -0.66
SUPT20H-217ENST00000484078 PRKCSHP14314 528 aaPredicted RBP10.9□□□□□ -0.66
SUPT20H-217ENST00000484078 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
SUPT20H-217ENST00000484078 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
SUPT20H-217ENST00000484078 MIER1Q8N108 512 aa10.89□□□□□ -0.67
SUPT20H-217ENST00000484078 DCAF1Q9Y4B6 1507 aa10.89□□□□□ -0.67
SUPT20H-217ENST00000484078 PAXIP1Q6ZW49 1069 aaPredicted RBP10.87□□□□□ -0.67
SUPT20H-217ENST00000484078 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
SUPT20H-217ENST00000484078 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
SUPT20H-217ENST00000484078 CFAP44Q96MT7 982 aa10.85□□□□□ -0.67
SUPT20H-217ENST00000484078 UNC13AQ9UPW8 1703 aa10.82□□□□□ -0.68
SUPT20H-217ENST00000484078 BCANQ96GW7 911 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms