RNA–Protein interactions for RNA: ENST00000469488.6

SUPT20H-207, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 1,313 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-207ENST00000469488 AEBP2Q6ZN18 517 aaPredicted RBP24.73■■□□□ 1.55
SUPT20H-207ENST00000469488 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.28
SUPT20H-207ENST00000469488 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
SUPT20H-207ENST00000469488 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
SUPT20H-207ENST00000469488 FOXD1Q16676 465 aa19.76■□□□□ 0.75
SUPT20H-207ENST00000469488 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
SUPT20H-207ENST00000469488 NISCHQ9Y2I1 1504 aa18.69■□□□□ 0.58
SUPT20H-207ENST00000469488 MSH5O43196 834 aa18.62■□□□□ 0.57
SUPT20H-207ENST00000469488 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
SUPT20H-207ENST00000469488 ABCC9O60706 1549 aa18.27■□□□□ 0.52
SUPT20H-207ENST00000469488 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
SUPT20H-207ENST00000469488 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
SUPT20H-207ENST00000469488 ADRA2BP18089 450 aa18.11■□□□□ 0.49
SUPT20H-207ENST00000469488 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
SUPT20H-207ENST00000469488 DNAJC5Q9H3Z4 198 aa17.28■□□□□ 0.36
SUPT20H-207ENST00000469488 CCDC180Q9P1Z9 1646 aa17.15■□□□□ 0.34
SUPT20H-207ENST00000469488 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
SUPT20H-207ENST00000469488 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
SUPT20H-207ENST00000469488 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.28
SUPT20H-207ENST00000469488 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
SUPT20H-207ENST00000469488 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
SUPT20H-207ENST00000469488 UNC13AQ9UPW8 1703 aa16.54■□□□□ 0.24
SUPT20H-207ENST00000469488 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.24
SUPT20H-207ENST00000469488 NACADO15069 1562 aa16.47■□□□□ 0.23
SUPT20H-207ENST00000469488 BICRAQ9NZM4 1560 aa16.46■□□□□ 0.23
SUPT20H-207ENST00000469488 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
SUPT20H-207ENST00000469488 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
SUPT20H-207ENST00000469488 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
SUPT20H-207ENST00000469488 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
SUPT20H-207ENST00000469488 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
SUPT20H-207ENST00000469488 CUX2O14529 1486 aa16.05■□□□□ 0.16
SUPT20H-207ENST00000469488 DCAF8L1A6NGE4 600 aa16.05■□□□□ 0.16
SUPT20H-207ENST00000469488 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
SUPT20H-207ENST00000469488 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
SUPT20H-207ENST00000469488 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
SUPT20H-207ENST00000469488 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
SUPT20H-207ENST00000469488 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
SUPT20H-207ENST00000469488 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
SUPT20H-207ENST00000469488 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
SUPT20H-207ENST00000469488 KCNA4P22459 653 aa15.71■□□□□ 0.11
SUPT20H-207ENST00000469488 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
SUPT20H-207ENST00000469488 SCRIBQ14160 1630 aa15.67■□□□□ 0.1
SUPT20H-207ENST00000469488 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
SUPT20H-207ENST00000469488 NESP48681 1621 aa15.42■□□□□ 0.06
SUPT20H-207ENST00000469488 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
SUPT20H-207ENST00000469488 THOC2Q8NI27 1593 aaKnown RBP15.4■□□□□ 0.06
SUPT20H-207ENST00000469488 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
SUPT20H-207ENST00000469488 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
SUPT20H-207ENST00000469488 ZCCHC6Q5VYS8 1495 aaKnown RBP15.26■□□□□ 0.03
SUPT20H-207ENST00000469488 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
SUPT20H-207ENST00000469488 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
SUPT20H-207ENST00000469488 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
SUPT20H-207ENST00000469488 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.02
SUPT20H-207ENST00000469488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.02
SUPT20H-207ENST00000469488 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
SUPT20H-207ENST00000469488 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
SUPT20H-207ENST00000469488 TRHP20396 242 aaPredicted RBP15.15■□□□□ 0.02
SUPT20H-207ENST00000469488 RIMBP3CA6NJZ7 1639 aa15.14■□□□□ 0.01
SUPT20H-207ENST00000469488 RIMBP3BA6NNM3 1639 aa15.14■□□□□ 0.01
SUPT20H-207ENST00000469488 RIMBP3Q9UFD9 1639 aa15.14■□□□□ 0.01
SUPT20H-207ENST00000469488 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
SUPT20H-207ENST00000469488 LAMC3Q9Y6N6 1575 aa15.04■□□□□ -0
SUPT20H-207ENST00000469488 ILDR1Q86SU0 546 aaPredicted RBP15.02■□□□□ -0
SUPT20H-207ENST00000469488 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
SUPT20H-207ENST00000469488 HMGXB3Q12766 1538 aa15□□□□□ -0.01
SUPT20H-207ENST00000469488 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
SUPT20H-207ENST00000469488 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
SUPT20H-207ENST00000469488 ARHGEF11O15085 1522 aa14.97□□□□□ -0.01
SUPT20H-207ENST00000469488 MRC2Q9UBG0 1479 aa14.94□□□□□ -0.02
SUPT20H-207ENST00000469488 WDR62O43379 1518 aa14.93□□□□□ -0.02
SUPT20H-207ENST00000469488 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
SUPT20H-207ENST00000469488 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
SUPT20H-207ENST00000469488 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
SUPT20H-207ENST00000469488 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
SUPT20H-207ENST00000469488 ARAP1Q96P48 1450 aa14.77□□□□□ -0.04
SUPT20H-207ENST00000469488 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
SUPT20H-207ENST00000469488 DSG3P32926 999 aa14.73□□□□□ -0.05
SUPT20H-207ENST00000469488 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
SUPT20H-207ENST00000469488 CAPN15O75808 1086 aa14.72□□□□□ -0.05
SUPT20H-207ENST00000469488 POTEHQ6S545 545 aa14.71□□□□□ -0.05
SUPT20H-207ENST00000469488 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
SUPT20H-207ENST00000469488 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
SUPT20H-207ENST00000469488 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
SUPT20H-207ENST00000469488 ZNF608Q9ULD9 1512 aaPredicted RBP14.57□□□□□ -0.08
SUPT20H-207ENST00000469488 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
SUPT20H-207ENST00000469488 CHD1O14646 1710 aa14.51□□□□□ -0.09
SUPT20H-207ENST00000469488 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
SUPT20H-207ENST00000469488 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
SUPT20H-207ENST00000469488 FBLN2P98095 1184 aa14.44□□□□□ -0.1
SUPT20H-207ENST00000469488 MROH2BQ7Z745 1585 aa14.44□□□□□ -0.1
SUPT20H-207ENST00000469488 KDM4FA0A1W2PPD8 638 aa14.41□□□□□ -0.1
SUPT20H-207ENST00000469488 ZBTB22O15209 634 aa14.41□□□□□ -0.1
SUPT20H-207ENST00000469488 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
SUPT20H-207ENST00000469488 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
SUPT20H-207ENST00000469488 EIF4G3O43432 1585 aaKnown RBP14.39□□□□□ -0.11
SUPT20H-207ENST00000469488 CFTRP13569 1480 aa14.35□□□□□ -0.11
SUPT20H-207ENST00000469488 ABCB7O75027 752 aa14.35□□□□□ -0.11
SUPT20H-207ENST00000469488 APLP2Q06481 763 aa14.33□□□□□ -0.12
SUPT20H-207ENST00000469488 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
SUPT20H-207ENST00000469488 AQRO60306 1485 aaKnown RBP eCLIP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms