RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
SUPT20H-222ENST00000495071 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
SUPT20H-222ENST00000495071 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
SUPT20H-222ENST00000495071 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
SUPT20H-222ENST00000495071 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
SUPT20H-222ENST00000495071 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
SUPT20H-222ENST00000495071 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.18
SUPT20H-222ENST00000495071 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
SUPT20H-222ENST00000495071 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
SUPT20H-222ENST00000495071 HRCP23327 699 aa22.08■■□□□ 1.13
SUPT20H-222ENST00000495071 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.1
SUPT20H-222ENST00000495071 LOC105371045A0A1W2PR82 267 aa21.85■■□□□ 1.09
SUPT20H-222ENST00000495071 PPARGC1BQ86YN6 1023 aaKnown RBP21.68■■□□□ 1.06
SUPT20H-222ENST00000495071 TRIM26Q12899 539 aaPredicted RBP21.51■■□□□ 1.03
SUPT20H-222ENST00000495071 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
SUPT20H-222ENST00000495071 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
SUPT20H-222ENST00000495071 ABCC9O60706 1549 aa21.46■■□□□ 1.03
SUPT20H-222ENST00000495071 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
SUPT20H-222ENST00000495071 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
SUPT20H-222ENST00000495071 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
SUPT20H-222ENST00000495071 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
SUPT20H-222ENST00000495071 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
SUPT20H-222ENST00000495071 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
SUPT20H-222ENST00000495071 NACADO15069 1562 aa20.95■□□□□ 0.94
SUPT20H-222ENST00000495071 MROH2BQ7Z745 1585 aa20.94■□□□□ 0.94
SUPT20H-222ENST00000495071 WIZO95785 1651 aa20.81■□□□□ 0.92
SUPT20H-222ENST00000495071 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
SUPT20H-222ENST00000495071 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
SUPT20H-222ENST00000495071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
SUPT20H-222ENST00000495071 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.89
SUPT20H-222ENST00000495071 UBTFP17480 764 aaKnown RBP20.52■□□□□ 0.88
SUPT20H-222ENST00000495071 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
SUPT20H-222ENST00000495071 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
SUPT20H-222ENST00000495071 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
SUPT20H-222ENST00000495071 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
SUPT20H-222ENST00000495071 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
SUPT20H-222ENST00000495071 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
SUPT20H-222ENST00000495071 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
SUPT20H-222ENST00000495071 SOGA1O94964 1423 aa20.4■□□□□ 0.86
SUPT20H-222ENST00000495071 SMARCA4P51532 1647 aa20.39■□□□□ 0.85
SUPT20H-222ENST00000495071 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
SUPT20H-222ENST00000495071 DIEXFQ68CQ4 756 aaKnown RBP20.35■□□□□ 0.85
SUPT20H-222ENST00000495071 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
SUPT20H-222ENST00000495071 SMARCA2P51531 1590 aa20.35■□□□□ 0.85
SUPT20H-222ENST00000495071 TNIKQ9UKE5 1360 aa20.33■□□□□ 0.84
SUPT20H-222ENST00000495071 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
SUPT20H-222ENST00000495071 EEA1Q15075 1411 aa20.27■□□□□ 0.84
SUPT20H-222ENST00000495071 ACIN1Q9UKV3 1341 aaKnown RBP20.26■□□□□ 0.83
SUPT20H-222ENST00000495071 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
SUPT20H-222ENST00000495071 CENPBP07199 599 aaPredicted RBP20.25■□□□□ 0.83
SUPT20H-222ENST00000495071 NEUROD1Q13562 356 aa20.22■□□□□ 0.83
SUPT20H-222ENST00000495071 GOLGA3Q08378 1498 aa20.2■□□□□ 0.82
SUPT20H-222ENST00000495071 RANGAP1P46060 587 aaPredicted RBP20.19■□□□□ 0.82
SUPT20H-222ENST00000495071 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
SUPT20H-222ENST00000495071 APLP2Q06481 763 aa20.17■□□□□ 0.82
SUPT20H-222ENST00000495071 UNC13AQ9UPW8 1703 aa20.12■□□□□ 0.81
SUPT20H-222ENST00000495071 ZNF316A6NFI3 1004 aaPredicted RBP20.1■□□□□ 0.81
SUPT20H-222ENST00000495071 GTF3C3Q9Y5Q9 886 aa20.1■□□□□ 0.81
SUPT20H-222ENST00000495071 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
SUPT20H-222ENST00000495071 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
SUPT20H-222ENST00000495071 CLIP1P30622 1438 aa20.04■□□□□ 0.8
SUPT20H-222ENST00000495071 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
SUPT20H-222ENST00000495071 SYNJ1O43426 1573 aa19.94■□□□□ 0.78
SUPT20H-222ENST00000495071 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
SUPT20H-222ENST00000495071 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
SUPT20H-222ENST00000495071 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
SUPT20H-222ENST00000495071 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
SUPT20H-222ENST00000495071 KIF21BO75037 1637 aa19.87■□□□□ 0.77
SUPT20H-222ENST00000495071 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
SUPT20H-222ENST00000495071 MIER1Q8N108 512 aa19.85■□□□□ 0.77
SUPT20H-222ENST00000495071 ITGAEP38570 1179 aa19.65■□□□□ 0.74
SUPT20H-222ENST00000495071 TOP2BQ02880 1626 aa19.64■□□□□ 0.74
SUPT20H-222ENST00000495071 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
SUPT20H-222ENST00000495071 CLSPNQ9HAW4 1339 aa19.57■□□□□ 0.72
SUPT20H-222ENST00000495071 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
SUPT20H-222ENST00000495071 DHX57Q6P158 1386 aaKnown RBP19.56■□□□□ 0.72
SUPT20H-222ENST00000495071 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
SUPT20H-222ENST00000495071 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
SUPT20H-222ENST00000495071 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
SUPT20H-222ENST00000495071 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
SUPT20H-222ENST00000495071 CUX1P39880 1505 aa19.46■□□□□ 0.71
SUPT20H-222ENST00000495071 CCNB3Q8WWL7 1395 aa19.45■□□□□ 0.7
SUPT20H-222ENST00000495071 NCAPD3P42695 1498 aa19.43■□□□□ 0.7
SUPT20H-222ENST00000495071 ATP1B4Q9UN42 357 aaPredicted RBP19.43■□□□□ 0.7
SUPT20H-222ENST00000495071 RRBP1Q9P2E9 1410 aaKnown RBP19.4■□□□□ 0.7
SUPT20H-222ENST00000495071 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
SUPT20H-222ENST00000495071 ARHGAP35Q9NRY4 1499 aa19.37■□□□□ 0.69
SUPT20H-222ENST00000495071 MYT1Q01538 1121 aa19.36■□□□□ 0.69
SUPT20H-222ENST00000495071 FAM50AQ14320 339 aaKnown RBP19.36■□□□□ 0.69
SUPT20H-222ENST00000495071 CUX2O14529 1486 aa19.36■□□□□ 0.69
SUPT20H-222ENST00000495071 CFTRP13569 1480 aa19.35■□□□□ 0.69
SUPT20H-222ENST00000495071 P3H3Q8IVL6 736 aa19.33■□□□□ 0.69
SUPT20H-222ENST00000495071 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
SUPT20H-222ENST00000495071 IGF1RP08069 1367 aa19.28■□□□□ 0.68
SUPT20H-222ENST00000495071 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
SUPT20H-222ENST00000495071 SUPT16HQ9Y5B9 1047 aaKnown RBP19.25■□□□□ 0.67
SUPT20H-222ENST00000495071 SIN3AQ96ST3 1273 aa19.21■□□□□ 0.67
SUPT20H-222ENST00000495071 SETD5Q9C0A6 1442 aa19.21■□□□□ 0.67
SUPT20H-222ENST00000495071 DDX10Q13206 875 aaKnown RBP19.19■□□□□ 0.66
SUPT20H-222ENST00000495071 CADPSQ9ULU8 1353 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms