RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 NISCHQ9Y2I1 1504 aa37.09■■■■□ 3.53
NPLOC4-207ENST00000572346 ABCC9O60706 1549 aa33.35■■■□□ 2.93
NPLOC4-207ENST00000572346 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
NPLOC4-207ENST00000572346 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
NPLOC4-207ENST00000572346 NACADO15069 1562 aa31.5■■■□□ 2.63
NPLOC4-207ENST00000572346 DNAJC5BQ9UF47 199 aa31.34■■■□□ 2.61
NPLOC4-207ENST00000572346 DCAF8L2P0C7V8 631 aa31.31■■■□□ 2.6
NPLOC4-207ENST00000572346 MYO15BQ96JP2 1530 aa31.05■■■□□ 2.56
NPLOC4-207ENST00000572346 UNC13AQ9UPW8 1703 aa31.04■■■□□ 2.56
NPLOC4-207ENST00000572346 PABPN1Q86U42 306 aaKnown RBP eCLIP31.04■■■□□ 2.56
NPLOC4-207ENST00000572346 BICRAQ9NZM4 1560 aa30.83■■■□□ 2.53
NPLOC4-207ENST00000572346 ZCCHC6Q5VYS8 1495 aaKnown RBP30.73■■■□□ 2.51
NPLOC4-207ENST00000572346 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
NPLOC4-207ENST00000572346 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
NPLOC4-207ENST00000572346 SCRIBQ14160 1630 aa30.34■■■□□ 2.45
NPLOC4-207ENST00000572346 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.41
NPLOC4-207ENST00000572346 EIF4G1Q04637 1599 aaKnown RBP30.07■■■□□ 2.4
NPLOC4-207ENST00000572346 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
NPLOC4-207ENST00000572346 NCAPD3P42695 1498 aa29.09■■■□□ 2.25
NPLOC4-207ENST00000572346 ATAD2BQ9ULI0 1458 aa28.98■■■□□ 2.23
NPLOC4-207ENST00000572346 SMARCA4P51532 1647 aa28.95■■■□□ 2.23
NPLOC4-207ENST00000572346 SMARCA2P51531 1590 aa28.9■■■□□ 2.22
NPLOC4-207ENST00000572346 HMGXB3Q12766 1538 aa28.86■■■□□ 2.21
NPLOC4-207ENST00000572346 DNAJC5Q9H3Z4 198 aa28.81■■■□□ 2.2
NPLOC4-207ENST00000572346 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
NPLOC4-207ENST00000572346 ERCC6Q03468 1493 aa28.79■■■□□ 2.2
NPLOC4-207ENST00000572346 CUX2O14529 1486 aa28.77■■■□□ 2.2
NPLOC4-207ENST00000572346 BAZ1BQ9UIG0 1483 aaKnown RBP28.7■■■□□ 2.18
NPLOC4-207ENST00000572346 PEG3Q9GZU2 1588 aa28.67■■■□□ 2.18
NPLOC4-207ENST00000572346 NESP48681 1621 aa28.65■■■□□ 2.18
NPLOC4-207ENST00000572346 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
NPLOC4-207ENST00000572346 LAMC3Q9Y6N6 1575 aa28.44■■■□□ 2.14
NPLOC4-207ENST00000572346 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
NPLOC4-207ENST00000572346 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
NPLOC4-207ENST00000572346 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.11
NPLOC4-207ENST00000572346 WIZO95785 1651 aa28.25■■■□□ 2.11
NPLOC4-207ENST00000572346 CADPSQ9ULU8 1353 aa28.2■■■□□ 2.1
NPLOC4-207ENST00000572346 MRC2Q9UBG0 1479 aa28.02■■■□□ 2.08
NPLOC4-207ENST00000572346 RSF1Q96T23 1441 aaPredicted RBP27.97■■■□□ 2.07
NPLOC4-207ENST00000572346 WDR62O43379 1518 aa27.97■■■□□ 2.07
NPLOC4-207ENST00000572346 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
NPLOC4-207ENST00000572346 FANCD2Q9BXW9 1451 aa27.88■■■□□ 2.05
NPLOC4-207ENST00000572346 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
NPLOC4-207ENST00000572346 CFTRP13569 1480 aa27.87■■■□□ 2.05
NPLOC4-207ENST00000572346 URB2Q14146 1524 aaKnown RBP27.66■■■□□ 2.02
NPLOC4-207ENST00000572346 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
NPLOC4-207ENST00000572346 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
NPLOC4-207ENST00000572346 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
NPLOC4-207ENST00000572346 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
NPLOC4-207ENST00000572346 IFT140Q96RY7 1462 aa27.35■■□□□ 1.97
NPLOC4-207ENST00000572346 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
NPLOC4-207ENST00000572346 ZNF608Q9ULD9 1512 aaPredicted RBP27.32■■□□□ 1.96
NPLOC4-207ENST00000572346 ABCC8Q09428 1581 aa27.27■■□□□ 1.96
NPLOC4-207ENST00000572346 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
NPLOC4-207ENST00000572346 EIF4G3O43432 1585 aaKnown RBP27.17■■□□□ 1.94
NPLOC4-207ENST00000572346 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
NPLOC4-207ENST00000572346 RIMBP3CA6NJZ7 1639 aa27.1■■□□□ 1.93
NPLOC4-207ENST00000572346 RIMBP3BA6NNM3 1639 aa27.1■■□□□ 1.93
NPLOC4-207ENST00000572346 RIMBP3Q9UFD9 1639 aa27.1■■□□□ 1.93
NPLOC4-207ENST00000572346 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.922e-6■■□□□ 13.2
NPLOC4-207ENST00000572346 POLA1P09884 1462 aaPredicted RBP27.06■■□□□ 1.92
NPLOC4-207ENST00000572346 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
NPLOC4-207ENST00000572346 CHD1O14646 1710 aa26.99■■□□□ 1.91
NPLOC4-207ENST00000572346 RAD54L2Q9Y4B4 1467 aa26.97■■□□□ 1.91
NPLOC4-207ENST00000572346 SOGA1O94964 1423 aa26.93■■□□□ 1.9
NPLOC4-207ENST00000572346 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
NPLOC4-207ENST00000572346 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
NPLOC4-207ENST00000572346 FBLN2P98095 1184 aa26.88■■□□□ 1.89
NPLOC4-207ENST00000572346 CUX1P39880 1505 aa26.85■■□□□ 1.89
NPLOC4-207ENST00000572346 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
NPLOC4-207ENST00000572346 CYB5RLQ6IPT4 315 aa26.8■■□□□ 1.88
NPLOC4-207ENST00000572346 SNAPC4Q5SXM2 1469 aa26.79■■□□□ 1.88
NPLOC4-207ENST00000572346 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
NPLOC4-207ENST00000572346 MAGI1Q96QZ7 1491 aaPredicted RBP26.71■■□□□ 1.87
NPLOC4-207ENST00000572346 GRIN2BQ13224 1484 aa26.7■■□□□ 1.87
NPLOC4-207ENST00000572346 SUPT5HO00267 1087 aaKnown RBP26.68■■□□□ 1.86
NPLOC4-207ENST00000572346 CHMP7Q8WUX9 453 aaPredicted RBP26.68■■□□□ 1.86
NPLOC4-207ENST00000572346 CLASP1Q7Z460 1538 aa26.67■■□□□ 1.86
NPLOC4-207ENST00000572346 SYNJ1O43426 1573 aa26.64■■□□□ 1.86
NPLOC4-207ENST00000572346 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
NPLOC4-207ENST00000572346 PBRM1Q86U86 1689 aa26.61■■□□□ 1.85
NPLOC4-207ENST00000572346 GAPVD1Q14C86 1478 aa26.61■■□□□ 1.85
NPLOC4-207ENST00000572346 ABCA10Q8WWZ4 1543 aa26.58■■□□□ 1.85
NPLOC4-207ENST00000572346 ABCA5Q8WWZ7 1642 aa26.55■■□□□ 1.84
NPLOC4-207ENST00000572346 TRHP20396 242 aaPredicted RBP26.52■■□□□ 1.84
NPLOC4-207ENST00000572346 WRNQ14191 1432 aaPredicted RBP eCLIP26.45■■□□□ 1.82
NPLOC4-207ENST00000572346 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
NPLOC4-207ENST00000572346 TOP2BQ02880 1626 aa26.41■■□□□ 1.82
NPLOC4-207ENST00000572346 GRIN2AQ12879 1464 aa26.37■■□□□ 1.81
NPLOC4-207ENST00000572346 ADAMTS12P58397 1594 aa26.35■■□□□ 1.81
NPLOC4-207ENST00000572346 NUP160Q12769 1436 aa26.29■■□□□ 1.8
NPLOC4-207ENST00000572346 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
NPLOC4-207ENST00000572346 FHAD1B1AJZ9 1412 aa26.26■■□□□ 1.79
NPLOC4-207ENST00000572346 ERCC6L2Q5T890 1561 aa26.25■■□□□ 1.79
NPLOC4-207ENST00000572346 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
NPLOC4-207ENST00000572346 SHROOM2Q13796 1616 aa26.18■■□□□ 1.78
NPLOC4-207ENST00000572346 PRG4Q92954 1404 aaPredicted RBP26.03■■□□□ 1.76
NPLOC4-207ENST00000572346 JPH4Q96JJ6 628 aa26■■□□□ 1.75
NPLOC4-207ENST00000572346 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
NPLOC4-207ENST00000572346 IGF1RP08069 1367 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms