Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 FZD10-202ENST00000539839 3282 ntBASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AL138781.1-201ENST00000566567 1274 ntBASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC104771.1-201ENST00000603335 964 ntBASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC133041.1-202ENST00000642053 222 ntBASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NFIC-211ENST00000641145 8399 ntBASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 HLA-L-209ENST00000420110 1011 ntBASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AL355472.2-201ENST00000422958 438 ntBASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms