Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 DUX4L8-201ENST00000629013 1275 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 DUX4L3-201ENST00000630187 1275 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 DUX4L7-201ENST00000630678 1275 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 DUX4L5-201ENST00000630834 1275 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 AC067852.2-201ENST00000590513 2313 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 AC093525.10-201ENST00000625130 1569 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 AC087633.2-202ENST00000565166 1439 ntBASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 RBM17P2-201ENST00000616397 1405 ntBASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 AL031963.3-201ENST00000606441 850 ntBASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 AL035685.1-201ENST00000636663 812 ntBASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COMMD3Q9UBI1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 AC027682.1-201ENST00000562846 899 ntBASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.96■□□□□ 0.31
COMMD3Q9UBI1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COMMD3Q9UBI1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.96■□□□□ 0.3
COMMD3Q9UBI1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COMMD3Q9UBI1 KRT8P20-201ENST00000423953 1409 ntBASIC16.96■□□□□ 0.3
COMMD3Q9UBI1 AC135279.3-201ENST00000610945 1311 ntBASIC16.96■□□□□ 0.3
COMMD3Q9UBI1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms