Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.03■□□□□ 0.48
AP3D1O14617 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.03■□□□□ 0.48
AP3D1O14617 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.03■□□□□ 0.48
AP3D1O14617 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 AC073210.2-201ENST00000430369 194 ntBASIC18.03■□□□□ 0.48
AP3D1O14617 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.03■□□□□ 0.48
AP3D1O14617 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.03■□□□□ 0.48
AP3D1O14617 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
AP3D1O14617 PNMA6B-201ENST00000538162 1200 ntBASIC18.03■□□□□ 0.48
AP3D1O14617 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.03■□□□□ 0.48
AP3D1O14617 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 AC060766.5-201ENST00000590539 871 ntBASIC18.03■□□□□ 0.48
AP3D1O14617 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
AP3D1O14617 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
AP3D1O14617 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 AC116351.2-201ENST00000606540 1585 ntBASIC18.03■□□□□ 0.48
AP3D1O14617 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
AP3D1O14617 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP3D1O14617 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3D1O14617 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
AP3D1O14617 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3D1O14617 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3D1O14617 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3D1O14617 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3D1O14617 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3D1O14617 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3D1O14617 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
AP3D1O14617 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3D1O14617 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3D1O14617 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
AP3D1O14617 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3D1O14617 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.02■□□□□ 0.48
AP3D1O14617 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.02■□□□□ 0.48
AP3D1O14617 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3D1O14617 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.02■□□□□ 0.48
AP3D1O14617 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3D1O14617 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
AP3D1O14617 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.02■□□□□ 0.48
AP3D1O14617 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.02■□□□□ 0.48
AP3D1O14617 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.02■□□□□ 0.48
AP3D1O14617 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3D1O14617 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.02■□□□□ 0.48
AP3D1O14617 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3D1O14617 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3D1O14617 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.02■□□□□ 0.47
AP3D1O14617 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
AP3D1O14617 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
AP3D1O14617 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
AP3D1O14617 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3D1O14617 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3D1O14617 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
AP3D1O14617 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
AP3D1O14617 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.02■□□□□ 0.47
AP3D1O14617 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3D1O14617 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3D1O14617 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.01■□□□□ 0.47
AP3D1O14617 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.01■□□□□ 0.47
AP3D1O14617 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AP3D1O14617 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
AP3D1O14617 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
AP3D1O14617 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.01■□□□□ 0.47
AP3D1O14617 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.01■□□□□ 0.47
AP3D1O14617 RPS2P52-201ENST00000469610 820 ntBASIC18.01■□□□□ 0.47
AP3D1O14617 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.01■□□□□ 0.47
AP3D1O14617 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.01■□□□□ 0.47
AP3D1O14617 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AP3D1O14617 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.01■□□□□ 0.47
AP3D1O14617 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.01■□□□□ 0.47
AP3D1O14617 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3D1O14617 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms