RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
SNX27-203ENST00000368843 SUPT5HO00267 1087 aaKnown RBP29.45■■■□□ 2.3
SNX27-203ENST00000368843 EHMT2Q96KQ7 1210 aa29.29■■■□□ 2.28
SNX27-203ENST00000368843 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
SNX27-203ENST00000368843 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
SNX27-203ENST00000368843 APLP2Q06481 763 aa28.35■■■□□ 2.13
SNX27-203ENST00000368843 TTBK1Q5TCY1 1321 aaPredicted RBP28.24■■■□□ 2.11
SNX27-203ENST00000368843 PELP1Q8IZL8 1130 aaKnown RBP28.19■■■□□ 2.1
SNX27-203ENST00000368843 FAM9AQ8IZU1 332 aaPredicted RBP28.14■■■□□ 2.09
SNX27-203ENST00000368843 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
SNX27-203ENST00000368843 ATP1B4Q9UN42 357 aaPredicted RBP27.66■■■□□ 2.02
SNX27-203ENST00000368843 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
SNX27-203ENST00000368843 ERICH6Q7L0X2 663 aa27.46■■□□□ 1.99
SNX27-203ENST00000368843 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
SNX27-203ENST00000368843 UBTFP17480 764 aaKnown RBP27.12■■□□□ 1.93
SNX27-203ENST00000368843 CCER1Q8TC90 406 aaPredicted RBP27.11■■□□□ 1.93
SNX27-203ENST00000368843 YTHDC1Q96MU7 727 aaKnown RBP27.09■■□□□ 1.93
SNX27-203ENST00000368843 CENPBP07199 599 aaPredicted RBP26.93■■□□□ 1.9
SNX27-203ENST00000368843 PPARGC1BQ86YN6 1023 aaKnown RBP26.83■■□□□ 1.89
SNX27-203ENST00000368843 MYT1LQ9UL68 1186 aa26.83■■□□□ 1.88
SNX27-203ENST00000368843 ZEB1P37275 1124 aaPredicted RBP26.79■■□□□ 1.88
SNX27-203ENST00000368843 MYT1Q01538 1121 aa26.77■■□□□ 1.88
SNX27-203ENST00000368843 NEFLP07196 543 aa26.68■■□□□ 1.86
SNX27-203ENST00000368843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.62■■□□□ 1.85
SNX27-203ENST00000368843 HNRNPUL2Q1KMD3 747 aaKnown RBP26.62■■□□□ 1.85
SNX27-203ENST00000368843 CNGB1Q14028 1251 aaPredicted RBP26.51■■□□□ 1.83
SNX27-203ENST00000368843 POLR3GLQ9BT43 218 aa26.5■■□□□ 1.83
SNX27-203ENST00000368843 CHIC1Q5VXU3 224 aa26.46■■□□□ 1.83
SNX27-203ENST00000368843 ITGAEP38570 1179 aa26.45■■□□□ 1.82
SNX27-203ENST00000368843 SLC4A1APQ9BWU0 796 aaKnown RBP26.2■■□□□ 1.78
SNX27-203ENST00000368843 DAXXQ9UER7 740 aaPredicted RBP26.15■■□□□ 1.78
SNX27-203ENST00000368843 TRIM26Q12899 539 aaPredicted RBP25.97■■□□□ 1.75
SNX27-203ENST00000368843 LOC105371045A0A1W2PR82 267 aa25.77■■□□□ 1.72
SNX27-203ENST00000368843 FAM50AQ14320 339 aaKnown RBP25.7■■□□□ 1.7
SNX27-203ENST00000368843 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
SNX27-203ENST00000368843 TRIM52Q96A61 297 aa25.63■■□□□ 1.69
SNX27-203ENST00000368843 PABPN1Q86U42 306 aaKnown RBP eCLIP25.6■■□□□ 1.69
SNX27-203ENST00000368843 HRCP23327 699 aa25.6■■□□□ 1.69
SNX27-203ENST00000368843 ZNF316A6NFI3 1004 aaPredicted RBP25.54■■□□□ 1.68
SNX27-203ENST00000368843 BCL11AQ9H165 835 aa25.53■■□□□ 1.68
SNX27-203ENST00000368843 FBLN2P98095 1184 aa25.51■■□□□ 1.67
SNX27-203ENST00000368843 ABCC9O60706 1549 aa25.47■■□□□ 1.67
SNX27-203ENST00000368843 BCANQ96GW7 911 aa25.44■■□□□ 1.66
SNX27-203ENST00000368843 NEUROD1Q13562 356 aa25.44■■□□□ 1.66
SNX27-203ENST00000368843 SLC24A1O60721 1099 aa25.4■■□□□ 1.66
SNX27-203ENST00000368843 ZNF326Q5BKZ1 582 aaKnown RBP25.4■■□□□ 1.66
SNX27-203ENST00000368843 RTL5Q5HYW3 569 aaPredicted RBP25.32■■□□□ 1.64
SNX27-203ENST00000368843 ZBTB47Q9UFB7 747 aaPredicted RBP25.23■■□□□ 1.63
SNX27-203ENST00000368843 DIEXFQ68CQ4 756 aaKnown RBP25.2■■□□□ 1.63
SNX27-203ENST00000368843 ARID3CA6NKF2 412 aa25.17■■□□□ 1.62
SNX27-203ENST00000368843 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
SNX27-203ENST00000368843 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
SNX27-203ENST00000368843 ANP32CO43423 234 aa25.03■■□□□ 1.6
SNX27-203ENST00000368843 PLPPR3Q6T4P5 718 aa25.01■■□□□ 1.59
SNX27-203ENST00000368843 NEFMP07197 916 aa25■■□□□ 1.59
SNX27-203ENST00000368843 ZNF777Q9ULD5 760 aaPredicted RBP24.97■■□□□ 1.59
SNX27-203ENST00000368843 ESF1Q9H501 851 aaKnown RBP24.91■■□□□ 1.58
SNX27-203ENST00000368843 GTF3C3Q9Y5Q9 886 aa24.86■■□□□ 1.57
SNX27-203ENST00000368843 STAG3Q9UJ98 1225 aa24.79■■□□□ 1.56
SNX27-203ENST00000368843 CDK11AQ9UQ88 783 aaPredicted RBP24.78■■□□□ 1.56
SNX27-203ENST00000368843 CHGAP10645 457 aaKnown RBP24.76■■□□□ 1.55
SNX27-203ENST00000368843 NPM2Q86SE8 214 aaKnown RBP24.76■■□□□ 1.55
SNX27-203ENST00000368843 NPM1P06748 294 aaKnown RBP eCLIP24.6■■□□□ 1.53
SNX27-203ENST00000368843 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
SNX27-203ENST00000368843 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
SNX27-203ENST00000368843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.45■■□□□ 1.51
SNX27-203ENST00000368843 SCRIBQ14160 1630 aa24.44■■□□□ 1.5
SNX27-203ENST00000368843 EIF5BO60841 1220 aaKnown RBP24.42■■□□□ 1.5
SNX27-203ENST00000368843 SALL2Q9Y467 1007 aaPredicted RBP24.42■■□□□ 1.5
SNX27-203ENST00000368843 ARXQ96QS3 562 aa24.41■■□□□ 1.5
SNX27-203ENST00000368843 ANP32AP39687 249 aaKnown RBP24.4■■□□□ 1.5
SNX27-203ENST00000368843 A0A0G2JS52 829 aa24.37■■□□□ 1.49
SNX27-203ENST00000368843 TONSLQ96HA7 1378 aa24.36■■□□□ 1.49
SNX27-203ENST00000368843 HSP90AA1P07900 732 aaKnown RBP24.36■■□□□ 1.49
SNX27-203ENST00000368843 SENP3Q9H4L4 574 aaPredicted RBP24.35■■□□□ 1.49
SNX27-203ENST00000368843 CHIC2Q9UKJ5 165 aa24.3■■□□□ 1.48
SNX27-203ENST00000368843 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
SNX27-203ENST00000368843 ZBTB7CA1YPR0 619 aa24.26■■□□□ 1.47
SNX27-203ENST00000368843 FAM9BQ8IZU0 186 aa24.26■■□□□ 1.47
SNX27-203ENST00000368843 FKBP8Q14318 412 aa24.23■■□□□ 1.47
SNX27-203ENST00000368843 ANP32BQ92688 251 aaKnown RBP24.2■■□□□ 1.46
SNX27-203ENST00000368843 KDM2AQ9Y2K7 1162 aa24.2■■□□□ 1.46
SNX27-203ENST00000368843 NBR1Q14596 966 aa24.2■■□□□ 1.46
SNX27-203ENST00000368843 UPF2Q9HAU5 1272 aaKnown RBP24.19■■□□□ 1.46
SNX27-203ENST00000368843 HNRNPUQ00839 825 aaKnown RBP eCLIP24.16■■□□□ 1.46
SNX27-203ENST00000368843 C14orf37Q86TY3 774 aa24.15■■□□□ 1.46
SNX27-203ENST00000368843 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
SNX27-203ENST00000368843 WDR43Q15061 677 aaKnown RBP eCLIP24.13■■□□□ 1.45
SNX27-203ENST00000368843 DDX10Q13206 875 aaKnown RBP24.11■■□□□ 1.45
SNX27-203ENST00000368843 TMC1Q8TDI8 760 aa24.09■■□□□ 1.45
SNX27-203ENST00000368843 TSPY4P0CV99 314 aa24.09■■□□□ 1.45
SNX27-203ENST00000368843 TSPY10P0CW01 314 aa24.09■■□□□ 1.45
SNX27-203ENST00000368843 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.45
SNX27-203ENST00000368843 IRX6P78412 446 aaPredicted RBP24.04■■□□□ 1.44
SNX27-203ENST00000368843 PPP1R15AO75807 674 aaPredicted RBP24.04■■□□□ 1.44
SNX27-203ENST00000368843 KCNH8Q96L42 1107 aa24.01■■□□□ 1.43
SNX27-203ENST00000368843 SENP3-EIF4A1A0A087X0R7 540 aa24.01■■□□□ 1.43
SNX27-203ENST00000368843 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.01■■□□□ 1.43
SNX27-203ENST00000368843 MTUS2Q5JR59 1369 aa23.98■■□□□ 1.43
SNX27-203ENST00000368843 ARID4BQ4LE39 1312 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms