Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL589743.5-201ENST00000616611 1050 ntBASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 AC116351.2-201ENST00000606540 1585 ntBASIC15□□□□□ -0.01
TRAV5A0A0B4J249 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 AC008694.1-202ENST00000636953 945 ntBASIC15□□□□□ -0.01
TRAV5A0A0B4J249 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAV5A0A0B4J249 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 WIZP1-201ENST00000531444 2299 ntBASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 KRT17P1-201ENST00000399211 1546 ntBASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV5A0A0B4J249 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms