RNA–Protein interactions for RNA: ENST00000300441.8

ACSF2-201, Transcript of acyl-CoA synthetase family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSF2, Length 2,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF2-201ENST00000300441 NISCHQ9Y2I1 1504 aa37.43■■■■□ 3.58
ACSF2-201ENST00000300441 SHROOM4Q9ULL8 1493 aa32.12■■■□□ 2.73
ACSF2-201ENST00000300441 ZCCHC6Q5VYS8 1495 aaKnown RBP31.74■■■□□ 2.67
ACSF2-201ENST00000300441 CCDC180Q9P1Z9 1646 aa31.68■■■□□ 2.66
ACSF2-201ENST00000300441 SUPT5HO00267 1087 aaKnown RBP31.64■■■□□ 2.66
ACSF2-201ENST00000300441 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
ACSF2-201ENST00000300441 CHIC1Q5VXU3 224 aa30.94■■■□□ 2.54
ACSF2-201ENST00000300441 DCAF8L2P0C7V8 631 aa30.88■■■□□ 2.53
ACSF2-201ENST00000300441 DCAF1Q9Y4B6 1507 aa30.71■■■□□ 2.51
ACSF2-201ENST00000300441 HRCP23327 699 aa30.56■■■□□ 2.48
ACSF2-201ENST00000300441 PCGF6Q9BYE7 350 aa30.31■■■□□ 2.44
ACSF2-201ENST00000300441 LOC105371045A0A1W2PR82 267 aa30.03■■■□□ 2.4
ACSF2-201ENST00000300441 ABCC9O60706 1549 aa30.02■■■□□ 2.4
ACSF2-201ENST00000300441 PPARGC1BQ86YN6 1023 aaKnown RBP29.86■■■□□ 2.37
ACSF2-201ENST00000300441 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
ACSF2-201ENST00000300441 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
ACSF2-201ENST00000300441 TRIM26Q12899 539 aaPredicted RBP29.67■■■□□ 2.34
ACSF2-201ENST00000300441 RB1CC1Q8TDY2 1594 aa29.51■■■□□ 2.31
ACSF2-201ENST00000300441 TRIM41Q8WV44 630 aa29.45■■■□□ 2.31
ACSF2-201ENST00000300441 FAM9AQ8IZU1 332 aaPredicted RBP29.22■■■□□ 2.27
ACSF2-201ENST00000300441 NACADO15069 1562 aa29.19■■■□□ 2.26
ACSF2-201ENST00000300441 CECR2Q9BXF3 1484 aa29.18■■■□□ 2.26
ACSF2-201ENST00000300441 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
ACSF2-201ENST00000300441 MROH2BQ7Z745 1585 aa29.12■■■□□ 2.25
ACSF2-201ENST00000300441 WIZO95785 1651 aa29■■■□□ 2.23
ACSF2-201ENST00000300441 EHMT2Q96KQ7 1210 aa28.96■■■□□ 2.23
ACSF2-201ENST00000300441 BAZ1AQ9NRL2 1556 aaPredicted RBP28.85■■■□□ 2.21
ACSF2-201ENST00000300441 EIF4G1Q04637 1599 aaKnown RBP28.77■■■□□ 2.2
ACSF2-201ENST00000300441 TOP2AP11388 1531 aaKnown RBP28.53■■■□□ 2.16
ACSF2-201ENST00000300441 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
ACSF2-201ENST00000300441 SMARCA4P51532 1647 aa28.45■■■□□ 2.15
ACSF2-201ENST00000300441 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
ACSF2-201ENST00000300441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.41■■■□□ 2.14
ACSF2-201ENST00000300441 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
ACSF2-201ENST00000300441 SCAF1Q9H7N4 1312 aaKnown RBP28.36■■■□□ 2.13
ACSF2-201ENST00000300441 CCER1Q8TC90 406 aaPredicted RBP28.35■■■□□ 2.13
ACSF2-201ENST00000300441 WRNQ14191 1432 aaPredicted RBP eCLIP28.34■■■□□ 2.13
ACSF2-201ENST00000300441 UNC13AQ9UPW8 1703 aa28.3■■■□□ 2.12
ACSF2-201ENST00000300441 CEP162Q5TB80 1403 aa28.28■■■□□ 2.12
ACSF2-201ENST00000300441 SOGA1O94964 1423 aa28.25■■■□□ 2.11
ACSF2-201ENST00000300441 TNIKQ9UKE5 1360 aa28.19■■■□□ 2.1
ACSF2-201ENST00000300441 EEA1Q15075 1411 aa28.15■■■□□ 2.1
ACSF2-201ENST00000300441 PELP1Q8IZL8 1130 aaKnown RBP28.14■■■□□ 2.09
ACSF2-201ENST00000300441 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
ACSF2-201ENST00000300441 RUSC2Q8N2Y8 1516 aa28.09■■■□□ 2.09
ACSF2-201ENST00000300441 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.09
ACSF2-201ENST00000300441 UBTFP17480 764 aaKnown RBP28■■■□□ 2.07
ACSF2-201ENST00000300441 DIEXFQ68CQ4 756 aaKnown RBP27.99■■■□□ 2.07
ACSF2-201ENST00000300441 GOLGA3Q08378 1498 aa27.99■■■□□ 2.07
ACSF2-201ENST00000300441 ACIN1Q9UKV3 1341 aaKnown RBP27.98■■■□□ 2.07
ACSF2-201ENST00000300441 NEUROD1Q13562 356 aa27.91■■■□□ 2.06
ACSF2-201ENST00000300441 BICRAQ9NZM4 1560 aa27.89■■■□□ 2.06
ACSF2-201ENST00000300441 PEG3Q9GZU2 1588 aa27.88■■■□□ 2.05
ACSF2-201ENST00000300441 PABPN1Q86U42 306 aaKnown RBP eCLIP27.83■■■□□ 2.056e-6■■■■□ 21.1
ACSF2-201ENST00000300441 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
ACSF2-201ENST00000300441 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
ACSF2-201ENST00000300441 KIF21BO75037 1637 aa27.79■■■□□ 2.04
ACSF2-201ENST00000300441 CENPBP07199 599 aaPredicted RBP27.76■■■□□ 2.03
ACSF2-201ENST00000300441 ZNF316A6NFI3 1004 aaPredicted RBP27.69■■■□□ 2.02
ACSF2-201ENST00000300441 CLIP1P30622 1438 aa27.67■■■□□ 2.02
ACSF2-201ENST00000300441 GTF3C3Q9Y5Q9 886 aa27.66■■■□□ 2.02
ACSF2-201ENST00000300441 ATAD2BQ9ULI0 1458 aa27.62■■■□□ 2.01
ACSF2-201ENST00000300441 VPS8Q8N3P4 1428 aa27.6■■■□□ 2.01
ACSF2-201ENST00000300441 BAZ1BQ9UIG0 1483 aaKnown RBP27.6■■■□□ 2.01
ACSF2-201ENST00000300441 HNRNPUL2Q1KMD3 747 aaKnown RBP27.58■■■□□ 2.01
ACSF2-201ENST00000300441 RAPGEF2Q9Y4G8 1499 aa27.55■■■□□ 2
ACSF2-201ENST00000300441 APLP2Q06481 763 aa27.44■■□□□ 1.98
ACSF2-201ENST00000300441 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
ACSF2-201ENST00000300441 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
ACSF2-201ENST00000300441 MIER1Q8N108 512 aa27.35■■□□□ 1.97
ACSF2-201ENST00000300441 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
ACSF2-201ENST00000300441 YTHDC1Q96MU7 727 aaKnown RBP27.33■■□□□ 1.97
ACSF2-201ENST00000300441 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
ACSF2-201ENST00000300441 PRXQ9BXM0 1461 aa27.24■■□□□ 1.95
ACSF2-201ENST00000300441 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
ACSF2-201ENST00000300441 CLSPNQ9HAW4 1339 aa27.15■■□□□ 1.94
ACSF2-201ENST00000300441 DHX57Q6P158 1386 aaKnown RBP27.13■■□□□ 1.93
ACSF2-201ENST00000300441 CUX1P39880 1505 aa27.09■■□□□ 1.93
ACSF2-201ENST00000300441 KANK4Q5T7N3 995 aaPredicted RBP27.08■■□□□ 1.93
ACSF2-201ENST00000300441 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
ACSF2-201ENST00000300441 KIF27Q86VH2 1401 aa27.02■■□□□ 1.92
ACSF2-201ENST00000300441 RRBP1Q9P2E9 1410 aaKnown RBP27.02■■□□□ 1.92
ACSF2-201ENST00000300441 NCAPD3P42695 1498 aa27.01■■□□□ 1.91
ACSF2-201ENST00000300441 CUX2O14529 1486 aa26.92■■□□□ 1.9
ACSF2-201ENST00000300441 ARHGAP35Q9NRY4 1499 aa26.92■■□□□ 1.9
ACSF2-201ENST00000300441 CFTRP13569 1480 aa26.91■■□□□ 1.9
ACSF2-201ENST00000300441 CCNB3Q8WWL7 1395 aa26.87■■□□□ 1.89
ACSF2-201ENST00000300441 MYT1Q01538 1121 aa26.77■■□□□ 1.88
ACSF2-201ENST00000300441 PRDM2Q13029 1718 aa26.75■■□□□ 1.87
ACSF2-201ENST00000300441 ITGAEP38570 1179 aa26.72■■□□□ 1.87
ACSF2-201ENST00000300441 TIAM1Q13009 1591 aa26.7■■□□□ 1.86
ACSF2-201ENST00000300441 IGF1RP08069 1367 aa26.7■■□□□ 1.86
ACSF2-201ENST00000300441 MAP3K1Q13233 1512 aa26.68■■□□□ 1.86
ACSF2-201ENST00000300441 RAB3GAP2Q9H2M9 1393 aa26.67■■□□□ 1.86
ACSF2-201ENST00000300441 MAPKBP1O60336 1514 aa26.65■■□□□ 1.86
ACSF2-201ENST00000300441 SUPT16HQ9Y5B9 1047 aaKnown RBP26.59■■□□□ 1.85
ACSF2-201ENST00000300441 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.85
ACSF2-201ENST00000300441 LRRC9Q6ZRR7 1453 aa26.58■■□□□ 1.85
ACSF2-201ENST00000300441 SETD5Q9C0A6 1442 aa26.55■■□□□ 1.84
ACSF2-201ENST00000300441 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms