Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 SLC47A1P1-202ENST00000449666 945 ntBASIC15.65■□□□□ 0.1
NKX6-2Q9C056 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NKX6-2Q9C056 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.1
NKX6-2Q9C056 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.64■□□□□ 0.1
NKX6-2Q9C056 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 KRT16P3-201ENST00000439127 1283 ntBASIC15.64■□□□□ 0.09
NKX6-2Q9C056 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-2Q9C056 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-2Q9C056 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NKX6-2Q9C056 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms