RNA–Protein interactions for RNA: ENST00000312841.9

HR-201, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 5 BASIC

Gene HR, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-201ENST00000312841 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
HR-201ENST00000312841 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
HR-201ENST00000312841 SUPT5HO00267 1087 aaKnown RBP29.03■■■□□ 2.24
HR-201ENST00000312841 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
HR-201ENST00000312841 APLP2Q06481 763 aa27.91■■■□□ 2.06
HR-201ENST00000312841 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
HR-201ENST00000312841 PELP1Q8IZL8 1130 aaKnown RBP27.6■■■□□ 2.01
HR-201ENST00000312841 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.99
HR-201ENST00000312841 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
HR-201ENST00000312841 ZEB1P37275 1124 aaPredicted RBP27.03■■□□□ 1.92
HR-201ENST00000312841 UBTFP17480 764 aaKnown RBP26.82■■□□□ 1.88
HR-201ENST00000312841 PCGF6Q9BYE7 350 aa26.74■■□□□ 1.87
HR-201ENST00000312841 ATP1B4Q9UN42 357 aaPredicted RBP26.61■■□□□ 1.85
HR-201ENST00000312841 RANGAP1P46060 587 aaPredicted RBP26.58■■□□□ 1.85
HR-201ENST00000312841 TTBK1Q5TCY1 1321 aaPredicted RBP26.57■■□□□ 1.84
HR-201ENST00000312841 CCER1Q8TC90 406 aaPredicted RBP26.55■■□□□ 1.84
HR-201ENST00000312841 CENPBP07199 599 aaPredicted RBP26.44■■□□□ 1.82
HR-201ENST00000312841 ABCC9O60706 1549 aa26.27■■□□□ 1.8
HR-201ENST00000312841 ERICH6Q7L0X2 663 aa26.26■■□□□ 1.79
HR-201ENST00000312841 TRIM26Q12899 539 aaPredicted RBP26.21■■□□□ 1.79
HR-201ENST00000312841 CHIC1Q5VXU3 224 aa26.08■■□□□ 1.77
HR-201ENST00000312841 CCDC180Q9P1Z9 1646 aa25.9■■□□□ 1.74
HR-201ENST00000312841 NEFLP07196 543 aa25.9■■□□□ 1.74
HR-201ENST00000312841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.89■■□□□ 1.73
HR-201ENST00000312841 HNRNPUL2Q1KMD3 747 aaKnown RBP25.89■■□□□ 1.73
HR-201ENST00000312841 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
HR-201ENST00000312841 MYT1LQ9UL68 1186 aa25.72■■□□□ 1.71
HR-201ENST00000312841 ZCCHC6Q5VYS8 1495 aaKnown RBP25.68■■□□□ 1.7
HR-201ENST00000312841 PPARGC1BQ86YN6 1023 aaKnown RBP25.64■■□□□ 1.7
HR-201ENST00000312841 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
HR-201ENST00000312841 ITGAEP38570 1179 aa25.57■■□□□ 1.68
HR-201ENST00000312841 HRCP23327 699 aa25.55■■□□□ 1.68
HR-201ENST00000312841 YTHDC1Q96MU7 727 aaKnown RBP25.44■■□□□ 1.66
HR-201ENST00000312841 SCRIBQ14160 1630 aa25.39■■□□□ 1.66
HR-201ENST00000312841 MYT1Q01538 1121 aa25.35■■□□□ 1.65
HR-201ENST00000312841 FAM50AQ14320 339 aaKnown RBP25.28■■□□□ 1.64
HR-201ENST00000312841 DAXXQ9UER7 740 aaPredicted RBP25.27■■□□□ 1.64
HR-201ENST00000312841 RB1CC1Q8TDY2 1594 aa25.25■■□□□ 1.63
HR-201ENST00000312841 POLR3GLQ9BT43 218 aa25.2■■□□□ 1.63
HR-201ENST00000312841 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
HR-201ENST00000312841 TRIM52Q96A61 297 aa25.13■■□□□ 1.61
HR-201ENST00000312841 NACADO15069 1562 aa25.08■■□□□ 1.61
HR-201ENST00000312841 CDK11AQ9UQ88 783 aaPredicted RBP25.04■■□□□ 1.6
HR-201ENST00000312841 FBLN2P98095 1184 aa25.01■■□□□ 1.59
HR-201ENST00000312841 DIEXFQ68CQ4 756 aaKnown RBP24.92■■□□□ 1.58
HR-201ENST00000312841 SLC4A1APQ9BWU0 796 aaKnown RBP24.88■■□□□ 1.57
HR-201ENST00000312841 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
HR-201ENST00000312841 NEUROD1Q13562 356 aa24.79■■□□□ 1.56
HR-201ENST00000312841 ANP32CO43423 234 aa24.75■■□□□ 1.55
HR-201ENST00000312841 EEA1Q15075 1411 aa24.73■■□□□ 1.55
HR-201ENST00000312841 P3H3Q8IVL6 736 aa24.65■■□□□ 1.54
HR-201ENST00000312841 CNGB1Q14028 1251 aaPredicted RBP24.64■■□□□ 1.54
HR-201ENST00000312841 CLSPNQ9HAW4 1339 aa24.62■■□□□ 1.53
HR-201ENST00000312841 ZNF316A6NFI3 1004 aaPredicted RBP24.61■■□□□ 1.53
HR-201ENST00000312841 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
HR-201ENST00000312841 NPM1P06748 294 aaKnown RBP eCLIP24.57■■□□□ 1.52
HR-201ENST00000312841 ZNF326Q5BKZ1 582 aaKnown RBP24.56■■□□□ 1.52
HR-201ENST00000312841 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
HR-201ENST00000312841 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
HR-201ENST00000312841 RTL5Q5HYW3 569 aaPredicted RBP24.52■■□□□ 1.52
HR-201ENST00000312841 ZNF777Q9ULD5 760 aaPredicted RBP24.51■■□□□ 1.51
HR-201ENST00000312841 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
HR-201ENST00000312841 NEFMP07197 916 aa24.49■■□□□ 1.51
HR-201ENST00000312841 ESF1Q9H501 851 aaKnown RBP24.44■■□□□ 1.5
HR-201ENST00000312841 GOLGA3Q08378 1498 aa24.42■■□□□ 1.5
HR-201ENST00000312841 TONSLQ96HA7 1378 aa24.41■■□□□ 1.5
HR-201ENST00000312841 ZBTB47Q9UFB7 747 aaPredicted RBP24.38■■□□□ 1.49
HR-201ENST00000312841 ARID3CA6NKF2 412 aa24.37■■□□□ 1.49
HR-201ENST00000312841 CLIP1P30622 1438 aa24.37■■□□□ 1.49
HR-201ENST00000312841 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
HR-201ENST00000312841 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
HR-201ENST00000312841 MTUS2Q5JR59 1369 aa24.33■■□□□ 1.49
HR-201ENST00000312841 BCANQ96GW7 911 aa24.33■■□□□ 1.48
HR-201ENST00000312841 KIF27Q86VH2 1401 aa24.3■■□□□ 1.48
HR-201ENST00000312841 TSPY4P0CV99 314 aa24.27■■□□□ 1.48
HR-201ENST00000312841 TSPY10P0CW01 314 aa24.27■■□□□ 1.48
HR-201ENST00000312841 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
HR-201ENST00000312841 CANXP27824 592 aaKnown RBP24.21■■□□□ 1.47
HR-201ENST00000312841 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
HR-201ENST00000312841 STAG3Q9UJ98 1225 aa24.19■■□□□ 1.46
HR-201ENST00000312841 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.46
HR-201ENST00000312841 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
HR-201ENST00000312841 SMARCA2P51531 1590 aa24.08■■□□□ 1.44
HR-201ENST00000312841 PLEKHD1A6NEE1 506 aa24.06■■□□□ 1.44
HR-201ENST00000312841 CHGAP10645 457 aaKnown RBP24.04■■□□□ 1.44
HR-201ENST00000312841 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
HR-201ENST00000312841 GTF3C3Q9Y5Q9 886 aa24■■□□□ 1.43
HR-201ENST00000312841 SLC24A1O60721 1099 aa23.98■■□□□ 1.43
HR-201ENST00000312841 CHIC2Q9UKJ5 165 aa23.97■■□□□ 1.43
HR-201ENST00000312841 FHAD1B1AJZ9 1412 aa23.95■■□□□ 1.43
HR-201ENST00000312841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.92■■□□□ 1.42
HR-201ENST00000312841 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
HR-201ENST00000312841 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.84■■□□□ 1.41
HR-201ENST00000312841 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
HR-201ENST00000312841 ANP32AP39687 249 aaKnown RBP23.81■■□□□ 1.4
HR-201ENST00000312841 EIF4G2P78344 907 aaKnown RBP eCLIP23.81■■□□□ 1.4
HR-201ENST00000312841 CFDP1Q9UEE9 299 aaPredicted RBP23.79■■□□□ 1.4
HR-201ENST00000312841 TMC1Q8TDI8 760 aa23.79■■□□□ 1.4
HR-201ENST00000312841 WDR43Q15061 677 aaKnown RBP eCLIP23.77■■□□□ 1.4
HR-201ENST00000312841 CDCA8Q53HL2 280 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms