Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 HCG11-201ENST00000411553 5696 ntBASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 PNMA6B-201ENST00000538162 1200 ntBASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 AC006058.3-201ENST00000606217 1069 ntBASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB3Q9Y5G1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 AC116351.2-201ENST00000606540 1585 ntBASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 AC128676.1-201ENST00000454392 318 ntBASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 AP006294.2-201ENST00000641667 209 ntBASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 AC093503.3-201ENST00000624917 2352 ntBASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 AL032819.2-201ENST00000624543 2162 ntBASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 AC092368.3-202ENST00000574180 1591 ntBASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB3Q9Y5G1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGB3Q9Y5G1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms