Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.22■□□□□ 0.35
LRRC28Q86X40 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC28Q86X40 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRC28Q86X40 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC28Q86X40 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC28Q86X40 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRC28Q86X40 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC28Q86X40 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRRC28Q86X40 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC28Q86X40 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC28Q86X40 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LRRC28Q86X40 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC28Q86X40 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC28Q86X40 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC28Q86X40 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC28Q86X40 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRRC28Q86X40 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 CYP2T3P-201ENST00000601990 817 ntBASIC17.21■□□□□ 0.35
LRRC28Q86X40 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 AL390961.4-201ENST00000623958 2535 ntBASIC17.21■□□□□ 0.35
LRRC28Q86X40 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC28Q86X40 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC28Q86X40 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC28Q86X40 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC28Q86X40 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC28Q86X40 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
LRRC28Q86X40 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 LSM12P1-201ENST00000411836 588 ntBASIC17.2■□□□□ 0.34
LRRC28Q86X40 AL355472.2-201ENST00000422958 438 ntBASIC17.2■□□□□ 0.34
LRRC28Q86X40 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC28Q86X40 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC28Q86X40 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 KRT18P68-201ENST00000392293 1000 ntBASIC17.19■□□□□ 0.34
LRRC28Q86X40 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms