RNA–Protein interactions for RNA: ENST00000513780.5

BACE1-209, Transcript of beta-secretase 1, humanhuman

TSL 1 (best) BASIC

Gene BACE1, Length 1,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-209ENST00000513780 NISCHQ9Y2I1 1504 aa46.9■■■■■ 5.1
BACE1-209ENST00000513780 CCDC180Q9P1Z9 1646 aa41.26■■■■■ 4.2
BACE1-209ENST00000513780 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
BACE1-209ENST00000513780 ABCC9O60706 1549 aa39.26■■■■□ 3.87
BACE1-209ENST00000513780 DCAF1Q9Y4B6 1507 aa38.85■■■■□ 3.81
BACE1-209ENST00000513780 DCAF8L2P0C7V8 631 aa38.69■■■■□ 3.78
BACE1-209ENST00000513780 MYO15BQ96JP2 1530 aa38.59■■■■□ 3.77
BACE1-209ENST00000513780 NACADO15069 1562 aa38.47■■■■□ 3.75
BACE1-209ENST00000513780 RB1CC1Q8TDY2 1594 aa38.26■■■■□ 3.71
BACE1-209ENST00000513780 SCRIBQ14160 1630 aa37.73■■■■□ 3.63
BACE1-209ENST00000513780 SHROOM4Q9ULL8 1493 aa37.73■■■■□ 3.63
BACE1-209ENST00000513780 UNC13AQ9UPW8 1703 aa37.52■■■■□ 3.6
BACE1-209ENST00000513780 BICRAQ9NZM4 1560 aa37.09■■■■□ 3.53
BACE1-209ENST00000513780 PABPN1Q86U42 306 aaKnown RBP eCLIP36.84■■■■□ 3.49
BACE1-209ENST00000513780 CECR2Q9BXF3 1484 aa36.41■■■■□ 3.42
BACE1-209ENST00000513780 BAZ1AQ9NRL2 1556 aaPredicted RBP36.28■■■■□ 3.4
BACE1-209ENST00000513780 SMARCA4P51532 1647 aa36.18■■■■□ 3.38
BACE1-209ENST00000513780 MROH2BQ7Z745 1585 aa36.18■■■■□ 3.38
BACE1-209ENST00000513780 RSF1Q96T23 1441 aaPredicted RBP36.13■■■■□ 3.37
BACE1-209ENST00000513780 SUPT5HO00267 1087 aaKnown RBP36.05■■■■□ 3.36
BACE1-209ENST00000513780 EIF4G1Q04637 1599 aaKnown RBP36■■■■□ 3.35
BACE1-209ENST00000513780 WIZO95785 1651 aa35.88■■■■□ 3.33
BACE1-209ENST00000513780 PEG3Q9GZU2 1588 aa35.8■■■■□ 3.32
BACE1-209ENST00000513780 SMARCA2P51531 1590 aa35.69■■■■□ 3.3
BACE1-209ENST00000513780 ATAD2BQ9ULI0 1458 aa35.66■■■■□ 3.3
BACE1-209ENST00000513780 CC2D2AQ9P2K1 1620 aa35.59■■■■□ 3.29
BACE1-209ENST00000513780 TOP2AP11388 1531 aaKnown RBP35.53■■■■□ 3.28
BACE1-209ENST00000513780 NCAPD3P42695 1498 aa35.46■■■■□ 3.27
BACE1-209ENST00000513780 BAZ1BQ9UIG0 1483 aaKnown RBP35.45■■■■□ 3.27
BACE1-209ENST00000513780 HMGXB3Q12766 1538 aa35.43■■■■□ 3.26
BACE1-209ENST00000513780 CCDC88BA6NC98 1476 aa35.09■■■■□ 3.21
BACE1-209ENST00000513780 DNAJC5BQ9UF47 199 aa35■■■■□ 3.19
BACE1-209ENST00000513780 CFTRP13569 1480 aa34.53■■■■□ 3.12
BACE1-209ENST00000513780 PRDM2Q13029 1718 aa34.49■■■■□ 3.11
BACE1-209ENST00000513780 CADPSQ9ULU8 1353 aa34.48■■■■□ 3.11
BACE1-209ENST00000513780 LAMC3Q9Y6N6 1575 aa34.39■■■■□ 3.1
BACE1-209ENST00000513780 NESP48681 1621 aa34.31■■■■□ 3.08
BACE1-209ENST00000513780 CHIC1Q5VXU3 224 aa34.31■■■■□ 3.08
BACE1-209ENST00000513780 ABCC8Q09428 1581 aa34.18■■■■□ 3.06
BACE1-209ENST00000513780 FANCD2Q9BXW9 1451 aa34.11■■■■□ 3.05
BACE1-209ENST00000513780 PDS5BQ9NTI5 1447 aa34.08■■■■□ 3.05
BACE1-209ENST00000513780 WRNQ14191 1432 aaPredicted RBP eCLIP34.05■■■■□ 3.04
BACE1-209ENST00000513780 KIF21AQ7Z4S6 1674 aa34■■■■□ 3.03
BACE1-209ENST00000513780 TRIM41Q8WV44 630 aa33.98■■■■□ 3.03
BACE1-209ENST00000513780 CEP164Q9UPV0 1460 aa33.97■■■■□ 3.03
BACE1-209ENST00000513780 SYNJ1O43426 1573 aa33.95■■■■□ 3.02
BACE1-209ENST00000513780 BIVM-ERCC5R4GMW8 1640 aa33.9■■■■□ 3.02
BACE1-209ENST00000513780 TOP2BQ02880 1626 aa33.89■■■■□ 3.02
BACE1-209ENST00000513780 CUX1P39880 1505 aa33.87■■■■□ 3.01
BACE1-209ENST00000513780 DNMBPQ6XZF7 1577 aa33.78■■■■□ 3
BACE1-209ENST00000513780 ERCC6Q03468 1493 aa33.74■■■□□ 2.99
BACE1-209ENST00000513780 URB2Q14146 1524 aaKnown RBP33.71■■■□□ 2.99
BACE1-209ENST00000513780 TOPBP1Q92547 1522 aa33.71■■■□□ 2.99
BACE1-209ENST00000513780 MRC2Q9UBG0 1479 aa33.68■■■□□ 2.98
BACE1-209ENST00000513780 THOC2Q8NI27 1593 aaKnown RBP33.58■■■□□ 2.97
BACE1-209ENST00000513780 FGD5Q6ZNL6 1462 aa33.57■■■□□ 2.96
BACE1-209ENST00000513780 WDR62O43379 1518 aa33.55■■■□□ 2.96
BACE1-209ENST00000513780 POLA1P09884 1462 aaPredicted RBP33.49■■■□□ 2.95
BACE1-209ENST00000513780 SOGA1O94964 1423 aa33.4■■■□□ 2.94
BACE1-209ENST00000513780 EEA1Q15075 1411 aa33.35■■■□□ 2.93
BACE1-209ENST00000513780 RAD54L2Q9Y4B4 1467 aa33.33■■■□□ 2.93
BACE1-209ENST00000513780 RUSC2Q8N2Y8 1516 aa33.31■■■□□ 2.92
BACE1-209ENST00000513780 WDR97A6NE52 1622 aa33.31■■■□□ 2.92
BACE1-209ENST00000513780 ABCA10Q8WWZ4 1543 aa33.3■■■□□ 2.92
BACE1-209ENST00000513780 TARBP1Q13395 1621 aaKnown RBP33.28■■■□□ 2.92
BACE1-209ENST00000513780 FAM9AQ8IZU1 332 aaPredicted RBP33.28■■■□□ 2.92
BACE1-209ENST00000513780 CUX2O14529 1486 aa33.27■■■□□ 2.92
BACE1-209ENST00000513780 KIF27Q86VH2 1401 aa33.23■■■□□ 2.91
BACE1-209ENST00000513780 IFT140Q96RY7 1462 aa33.2■■■□□ 2.91
BACE1-209ENST00000513780 CSRNP3Q8WYN3 585 aa33.12■■■□□ 2.89
BACE1-209ENST00000513780 ABCA5Q8WWZ7 1642 aa33.1■■■□□ 2.89
BACE1-209ENST00000513780 TDRD9Q8NDG6 1382 aaKnown RBP33.02■■■□□ 2.88
BACE1-209ENST00000513780 GAPVD1Q14C86 1478 aa33■■■□□ 2.87
BACE1-209ENST00000513780 ZNF608Q9ULD9 1512 aaPredicted RBP32.97■■■□□ 2.87
BACE1-209ENST00000513780 KIF21BO75037 1637 aa32.96■■■□□ 2.87
BACE1-209ENST00000513780 IGF1RP08069 1367 aa32.95■■■□□ 2.87
BACE1-209ENST00000513780 PBRM1Q86U86 1689 aa32.95■■■□□ 2.86
BACE1-209ENST00000513780 EIF4G3O43432 1585 aaKnown RBP32.93■■■□□ 2.86
BACE1-209ENST00000513780 ERICH3Q5RHP9 1530 aa32.93■■■□□ 2.86
BACE1-209ENST00000513780 AQRO60306 1485 aaKnown RBP eCLIP32.91■■■□□ 2.86
BACE1-209ENST00000513780 LOC105371045A0A1W2PR82 267 aa32.9■■■□□ 2.86
BACE1-209ENST00000513780 PRXQ9BXM0 1461 aa32.89■■■□□ 2.86
BACE1-209ENST00000513780 CUL7Q14999 1698 aa32.88■■■□□ 2.85
BACE1-209ENST00000513780 GOLGA3Q08378 1498 aa32.83■■■□□ 2.85
BACE1-209ENST00000513780 GRIN2BQ13224 1484 aa32.83■■■□□ 2.85
BACE1-209ENST00000513780 CARMIL1Q5VZK9 1371 aa32.79■■■□□ 2.84
BACE1-209ENST00000513780 RAPGEF2Q9Y4G8 1499 aa32.77■■■□□ 2.84
BACE1-209ENST00000513780 EHMT2Q96KQ7 1210 aa32.76■■■□□ 2.84
BACE1-209ENST00000513780 ADAMTS12P58397 1594 aa32.7■■■□□ 2.83
BACE1-209ENST00000513780 SNAPC4Q5SXM2 1469 aa32.65■■■□□ 2.82
BACE1-209ENST00000513780 FHAD1B1AJZ9 1412 aa32.65■■■□□ 2.82
BACE1-209ENST00000513780 MAGI1Q96QZ7 1491 aaPredicted RBP32.64■■■□□ 2.82
BACE1-209ENST00000513780 TNIKQ9UKE5 1360 aa32.61■■■□□ 2.81
BACE1-209ENST00000513780 UBTFP17480 764 aaKnown RBP32.61■■■□□ 2.81
BACE1-209ENST00000513780 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
BACE1-209ENST00000513780 CTTNBP2Q8WZ74 1663 aa32.46■■■□□ 2.79
BACE1-209ENST00000513780 GRIN2AQ12879 1464 aa32.43■■■□□ 2.78
BACE1-209ENST00000513780 CEP162Q5TB80 1403 aa32.38■■■□□ 2.77
BACE1-209ENST00000513780 CHMP7Q8WUX9 453 aaPredicted RBP32.36■■■□□ 2.77
BACE1-209ENST00000513780 CHD1O14646 1710 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms