Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.65□□□□□ -0.06
MRPL54Q6P161 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
MRPL54Q6P161 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
MRPL54Q6P161 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.65□□□□□ -0.07
MRPL54Q6P161 AC139713.2-201ENST00000641328 2723 ntBASIC14.65□□□□□ -0.07
MRPL54Q6P161 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.64□□□□□ -0.07
MRPL54Q6P161 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.64□□□□□ -0.07
MRPL54Q6P161 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.64□□□□□ -0.07
MRPL54Q6P161 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.64□□□□□ -0.07
MRPL54Q6P161 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 POU5F1P4-201ENST00000413175 1085 ntBASIC14.64□□□□□ -0.07
MRPL54Q6P161 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
MRPL54Q6P161 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MRPL54Q6P161 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
MRPL54Q6P161 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
MRPL54Q6P161 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
MRPL54Q6P161 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL54Q6P161 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 AC067852.2-201ENST00000590513 2313 ntBASIC14.63□□□□□ -0.07
MRPL54Q6P161 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 UNC93B8-201ENST00000511903 705 ntBASIC14.63□□□□□ -0.07
MRPL54Q6P161 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 AL356740.2-201ENST00000601559 647 ntBASIC14.63□□□□□ -0.07
MRPL54Q6P161 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL54Q6P161 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.63□□□□□ -0.07
MRPL54Q6P161 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MRPL54Q6P161 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL54Q6P161 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms