Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 FTX-204ENST00000430772 708 ntTSL 55.98□□□□□ -1.451e-7■■□□□ 12.8
SRSF1Q07955 FTX-208ENST00000602776 561 ntTSL 45.79□□□□□ -1.481e-7■■□□□ 12.8
SRSF1Q07955 FTX-205ENST00000455395 654 ntTSL 34.7□□□□□ -1.661e-7■■□□□ 12.8
SRSF1Q07955 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.096e-14■■□□□ 12.8
SRSF1Q07955 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.676e-14■■□□□ 12.8
SRSF1Q07955 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.926e-14■■□□□ 12.8
SRSF1Q07955 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.336e-14■■□□□ 12.8
SRSF1Q07955 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.62□□□□□ -1.836e-14■■□□□ 12.8
SRSF1Q07955 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.624e-8■■□□□ 12.8
SRSF1Q07955 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.6□□□□□ -0.072e-14■■□□□ 12.8
SRSF1Q07955 MAT2A-205ENST00000481412 1438 ntTSL 1 (best)10.32□□□□□ -0.762e-14■■□□□ 12.8
SRSF1Q07955 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.94■□□□□ 0.467e-8■■□□□ 12.8
SRSF1Q07955 EPS8L2-220ENST00000531393 2304 ntTSL 1 (best)15.13■□□□□ 0.017e-8■■□□□ 12.8
SRSF1Q07955 DHX38-214ENST00000579387 2258 ntTSL 513.58□□□□□ -0.242e-6■■□□□ 12.8
SRSF1Q07955 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.692e-6■■□□□ 12.8
SRSF1Q07955 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.92■□□□□ 0.621e-6■■□□□ 12.8
SRSF1Q07955 KMT5A-207ENST00000478781 725 ntTSL 526.71■■□□□ 1.875e-7■■□□□ 12.8
SRSF1Q07955 KMT5A-205ENST00000461103 1000 ntTSL 221.85■■□□□ 1.095e-7■■□□□ 12.8
SRSF1Q07955 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.025e-7■■□□□ 12.8
SRSF1Q07955 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.64□□□□□ -0.075e-7■■□□□ 12.8
SRSF1Q07955 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.135e-7■■□□□ 12.8
SRSF1Q07955 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.17□□□□□ -0.145e-7■■□□□ 12.8
SRSF1Q07955 SAFB2-210ENST00000591310 722 ntTSL 314.05□□□□□ -0.165e-7■■□□□ 12.8
SRSF1Q07955 FDFT1-205ENST00000525551 327 ntTSL 313.93□□□□□ -0.185e-7■■□□□ 12.8
SRSF1Q07955 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.195e-7■■□□□ 12.8
SRSF1Q07955 HYOU1-215ENST00000543287 2464 ntTSL 213.7□□□□□ -0.225e-7■■□□□ 12.8
SRSF1Q07955 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.77□□□□□ -0.375e-7■■□□□ 12.8
SRSF1Q07955 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.375e-7■■□□□ 12.8
SRSF1Q07955 HYOU1-207ENST00000530473 2023 ntTSL 512.45□□□□□ -0.425e-7■■□□□ 12.8
SRSF1Q07955 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.475e-7■■□□□ 12.8
SRSF1Q07955 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.05□□□□□ -0.485e-7■■□□□ 12.8
SRSF1Q07955 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.67□□□□□ -0.545e-7■■□□□ 12.8
SRSF1Q07955 SAFB2-211ENST00000592599 2260 ntTSL 211.59□□□□□ -0.555e-7■■□□□ 12.8
SRSF1Q07955 EXOSC10-207ENST00000474216 2007 ntTSL 211.59□□□□□ -0.555e-7■■□□□ 12.8
SRSF1Q07955 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.18□□□□□ -0.625e-7■■□□□ 12.8
SRSF1Q07955 ASNS-215ENST00000462436 698 ntTSL 211.14□□□□□ -0.633e-10■■□□□ 12.8
SRSF1Q07955 DCAF8-215ENST00000490368 876 ntTSL 311.07□□□□□ -0.645e-7■■□□□ 12.8
SRSF1Q07955 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.685e-7■■□□□ 12.8
SRSF1Q07955 KMT5A-203ENST00000437502 901 ntTSL 510.54□□□□□ -0.725e-7■■□□□ 12.8
SRSF1Q07955 KMT5A-204ENST00000437519 1774 ntTSL 210.43□□□□□ -0.745e-7■■□□□ 12.8
SRSF1Q07955 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC9.92□□□□□ -0.825e-7■■□□□ 12.8
SRSF1Q07955 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC9.81□□□□□ -0.845e-7■■□□□ 12.8
SRSF1Q07955 DCAF8-213ENST00000477163 513 ntTSL 39.7□□□□□ -0.865e-7■■□□□ 12.8
SRSF1Q07955 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC9.68□□□□□ -0.865e-7■■□□□ 12.8
SRSF1Q07955 DCAF8-209ENST00000466253 1078 ntTSL 59.39□□□□□ -0.915e-7■■□□□ 12.8
SRSF1Q07955 SAFB2-207ENST00000591101 551 ntTSL 29.2□□□□□ -0.945e-7■■□□□ 12.8
SRSF1Q07955 EXOSC10-202ENST00000376936 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.995e-7■■□□□ 12.8
SRSF1Q07955 EXOSC10-201ENST00000304457 2721 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.995e-7■■□□□ 12.8
SRSF1Q07955 EXOSC10-211ENST00000498576 486 ntTSL 48.87□□□□□ -0.995e-7■■□□□ 12.8
SRSF1Q07955 DNHD1-219ENST00000533649 2557 ntTSL 1 (best)8.47□□□□□ -1.051e-6■■□□□ 12.8
SRSF1Q07955 EXOSC10-205ENST00000470611 401 ntTSL 38.18□□□□□ -1.15e-7■■□□□ 12.8
SRSF1Q07955 RBL2-205ENST00000562837 738 ntTSL 46.42□□□□□ -1.385e-7■■□□□ 12.8
SRSF1Q07955 RBL2-203ENST00000544405 2025 ntTSL 25.75□□□□□ -1.495e-7■■□□□ 12.8
SRSF1Q07955 RBL2-202ENST00000379935 4467 ntTSL 1 (best)4.88□□□□□ -1.635e-7■■□□□ 12.8
SRSF1Q07955 KMT5A-208ENST00000485469 454 ntTSL 33.47□□□□□ -1.855e-7■■□□□ 12.8
SRSF1Q07955 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.77□□□□□ -1.975e-7■■□□□ 12.8
SRSF1Q07955 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.2□□□□□ -0.461e-6■■□□□ 12.8
SRSF1Q07955 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.358e-12■■□□□ 12.8
SRSF1Q07955 ILF3-204ENST00000585835 849 ntTSL 313.13□□□□□ -0.318e-12■■□□□ 12.8
SRSF1Q07955 C1orf52-202ENST00000344356 504 ntTSL 1 (best) BASIC10.67□□□□□ -0.78e-12■■□□□ 12.8
SRSF1Q07955 C1orf52-204ENST00000493514 631 ntTSL 1 (best)9.39□□□□□ -0.918e-12■■□□□ 12.8
SRSF1Q07955 C1orf52-201ENST00000294661 3391 ntTSL 1 (best)7.89□□□□□ -1.158e-12■■□□□ 12.8
SRSF1Q07955 EIF4A2-206ENST00000441007 480 ntTSL 313.69□□□□□ -0.225e-14■■□□□ 12.8
SRSF1Q07955 EIF4A2-208ENST00000445596 600 ntTSL 213.38□□□□□ -0.275e-14■■□□□ 12.8
SRSF1Q07955 EIF4A2-227ENST00000498746 579 ntTSL 212.32□□□□□ -0.445e-14■■□□□ 12.8
SRSF1Q07955 EIF4A2-215ENST00000467585 570 ntTSL 212.32□□□□□ -0.445e-14■■□□□ 12.8
SRSF1Q07955 EIF4A2-210ENST00000465032 578 ntTSL 26.51□□□□□ -1.375e-14■■□□□ 12.8
SRSF1Q07955 EIF4A2-212ENST00000465267 1054 ntTSL 26.51□□□□□ -1.375e-14■■□□□ 12.8
SRSF1Q07955 EIF4A2-224ENST00000495049 576 ntTSL 26.51□□□□□ -1.375e-14■■□□□ 12.8
SRSF1Q07955 EIF4A2-211ENST00000465222 676 ntTSL 25.93□□□□□ -1.465e-14■■□□□ 12.8
SRSF1Q07955 EIF4A2-221ENST00000491473 579 ntTSL 25.51□□□□□ -1.535e-14■■□□□ 12.8
SRSF1Q07955 EIF4A2-220ENST00000486805 590 ntTSL 23.28□□□□□ -1.885e-14■■□□□ 12.8
SRSF1Q07955 NECAB3-222ENST00000607805 969 ntTSL 520.93■□□□□ 0.941e-10■■□□□ 12.8
SRSF1Q07955 NECAB3-211ENST00000485399 1373 ntTSL 219.75■□□□□ 0.751e-10■■□□□ 12.8
SRSF1Q07955 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.57■□□□□ 0.41e-10■■□□□ 12.8
SRSF1Q07955 NECAB3-213ENST00000488489 2142 ntTSL 216.49■□□□□ 0.231e-10■■□□□ 12.8
SRSF1Q07955 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.121e-10■■□□□ 12.8
SRSF1Q07955 NECAB3-219ENST00000606690 900 ntTSL 513.97□□□□□ -0.171e-10■■□□□ 12.8
SRSF1Q07955 NECAB3-203ENST00000439478 925 ntTSL 513.97□□□□□ -0.171e-10■■□□□ 12.8
SRSF1Q07955 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.383e-6■■□□□ 12.8
SRSF1Q07955 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.293e-6■■□□□ 12.8
SRSF1Q07955 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.293e-6■■□□□ 12.8
SRSF1Q07955 AKT1-204ENST00000544168 1564 ntTSL 215.53■□□□□ 0.083e-6■■□□□ 12.8
SRSF1Q07955 AKT1-218ENST00000557552 8396 ntTSL 514.11□□□□□ -0.153e-6■■□□□ 12.8
SRSF1Q07955 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.363e-6■■□□□ 12.8
SRSF1Q07955 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.883e-6■■□□□ 12.8
SRSF1Q07955 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.993e-6■■□□□ 12.8
SRSF1Q07955 SLC25A37-211ENST00000523883 3651 ntTSL 27.6□□□□□ -1.191e-8■■□□□ 12.8
SRSF1Q07955 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.64e-8■■□□□ 12.8
SRSF1Q07955 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.864e-8■■□□□ 12.8
SRSF1Q07955 NECAB3-215ENST00000494174 859 ntTSL 518.32■□□□□ 0.521e-10■■□□□ 12.8
SRSF1Q07955 MICALL2-208ENST00000472100 5248 ntTSL 215□□□□□ -0.011e-6■■□□□ 12.7
SRSF1Q07955 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.381e-6■■□□□ 12.7
SRSF1Q07955 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.693e-6■■□□□ 12.7
SRSF1Q07955 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC10.4□□□□□ -0.743e-6■■□□□ 12.7
SRSF1Q07955 STRIP2-203ENST00000465033 587 ntTSL 310.29□□□□□ -0.763e-6■■□□□ 12.7
SRSF1Q07955 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.05□□□□□ -0.643e-7■■□□□ 12.7
SRSF1Q07955 SPHK1-206ENST00000590379 588 ntTSL 319.35■□□□□ 0.691e-7■■□□□ 12.7
SRSF1Q07955 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.661e-7■■□□□ 12.7
SRSF1Q07955 SPHK1-205ENST00000588682 858 ntTSL 318.33■□□□□ 0.521e-7■■□□□ 12.7
Retrieved 100 of 14,836 protein–RNA pairs in 76.1 ms