RNA–Protein interactions for RNA: ENST00000533649.1

DNHD1-219, Transcript of dynein heavy chain domain 1, humanhuman

TSL 1 (best)

Gene DNHD1, Length 2,557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNHD1-219ENST00000533649 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
DNHD1-219ENST00000533649 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.85
DNHD1-219ENST00000533649 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
DNHD1-219ENST00000533649 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
DNHD1-219ENST00000533649 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
DNHD1-219ENST00000533649 DCAF8L2P0C7V8 631 aa19.55■□□□□ 0.72
DNHD1-219ENST00000533649 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
DNHD1-219ENST00000533649 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
DNHD1-219ENST00000533649 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
DNHD1-219ENST00000533649 ABCC9O60706 1549 aa18.91■□□□□ 0.62
DNHD1-219ENST00000533649 NACADO15069 1562 aa18.87■□□□□ 0.61
DNHD1-219ENST00000533649 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
DNHD1-219ENST00000533649 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
DNHD1-219ENST00000533649 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
DNHD1-219ENST00000533649 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
DNHD1-219ENST00000533649 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
DNHD1-219ENST00000533649 HRCP23327 699 aa18.45■□□□□ 0.54
DNHD1-219ENST00000533649 CECR2Q9BXF3 1484 aa18.28■□□□□ 0.52
DNHD1-219ENST00000533649 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
DNHD1-219ENST00000533649 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
DNHD1-219ENST00000533649 PPARGC1BQ86YN6 1023 aaKnown RBP18.23■□□□□ 0.51
DNHD1-219ENST00000533649 FAM9AQ8IZU1 332 aaPredicted RBP18.22■□□□□ 0.51
DNHD1-219ENST00000533649 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
DNHD1-219ENST00000533649 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
DNHD1-219ENST00000533649 BAZ1AQ9NRL2 1556 aaPredicted RBP18.15■□□□□ 0.5
DNHD1-219ENST00000533649 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
DNHD1-219ENST00000533649 WIZO95785 1651 aa18.07■□□□□ 0.48
DNHD1-219ENST00000533649 BICRAQ9NZM4 1560 aa18.07■□□□□ 0.48
DNHD1-219ENST00000533649 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
DNHD1-219ENST00000533649 PABPN1Q86U42 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
DNHD1-219ENST00000533649 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
DNHD1-219ENST00000533649 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
DNHD1-219ENST00000533649 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
DNHD1-219ENST00000533649 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
DNHD1-219ENST00000533649 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
DNHD1-219ENST00000533649 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
DNHD1-219ENST00000533649 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
DNHD1-219ENST00000533649 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
DNHD1-219ENST00000533649 SOGA1O94964 1423 aa17.57■□□□□ 0.4
DNHD1-219ENST00000533649 BAZ1BQ9UIG0 1483 aaKnown RBP17.55■□□□□ 0.4
DNHD1-219ENST00000533649 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
DNHD1-219ENST00000533649 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
DNHD1-219ENST00000533649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
DNHD1-219ENST00000533649 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
DNHD1-219ENST00000533649 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
DNHD1-219ENST00000533649 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
DNHD1-219ENST00000533649 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
DNHD1-219ENST00000533649 UBTFP17480 764 aaKnown RBP17.4■□□□□ 0.38
DNHD1-219ENST00000533649 CCER1Q8TC90 406 aaPredicted RBP17.36■□□□□ 0.37
DNHD1-219ENST00000533649 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
DNHD1-219ENST00000533649 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
DNHD1-219ENST00000533649 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
DNHD1-219ENST00000533649 EEA1Q15075 1411 aa17.27■□□□□ 0.36
DNHD1-219ENST00000533649 SYNJ1O43426 1573 aa17.25■□□□□ 0.35
DNHD1-219ENST00000533649 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
DNHD1-219ENST00000533649 RANGAP1P46060 587 aaPredicted RBP17.19■□□□□ 0.34
DNHD1-219ENST00000533649 CFTRP13569 1480 aa17.15■□□□□ 0.34
DNHD1-219ENST00000533649 TOP2BQ02880 1626 aa17.13■□□□□ 0.33
DNHD1-219ENST00000533649 CC2D2AQ9P2K1 1620 aa17.13■□□□□ 0.33
DNHD1-219ENST00000533649 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
DNHD1-219ENST00000533649 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
DNHD1-219ENST00000533649 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
DNHD1-219ENST00000533649 CLIP1P30622 1438 aa17.09■□□□□ 0.33
DNHD1-219ENST00000533649 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
DNHD1-219ENST00000533649 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
DNHD1-219ENST00000533649 KIF21BO75037 1637 aa17.05■□□□□ 0.32
DNHD1-219ENST00000533649 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
DNHD1-219ENST00000533649 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
DNHD1-219ENST00000533649 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
DNHD1-219ENST00000533649 CUX1P39880 1505 aa17■□□□□ 0.31
DNHD1-219ENST00000533649 MYT1Q01538 1121 aa16.98■□□□□ 0.31
DNHD1-219ENST00000533649 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
DNHD1-219ENST00000533649 APLP2Q06481 763 aa16.94■□□□□ 0.3
DNHD1-219ENST00000533649 NEUROD1Q13562 356 aa16.89■□□□□ 0.3
DNHD1-219ENST00000533649 PRXQ9BXM0 1461 aa16.87■□□□□ 0.29
DNHD1-219ENST00000533649 KIF27Q86VH2 1401 aa16.85■□□□□ 0.29
DNHD1-219ENST00000533649 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
DNHD1-219ENST00000533649 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
DNHD1-219ENST00000533649 ACIN1Q9UKV3 1341 aaKnown RBP16.84■□□□□ 0.29
DNHD1-219ENST00000533649 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
DNHD1-219ENST00000533649 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
DNHD1-219ENST00000533649 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
DNHD1-219ENST00000533649 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
DNHD1-219ENST00000533649 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
DNHD1-219ENST00000533649 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
DNHD1-219ENST00000533649 NESP48681 1621 aa16.73■□□□□ 0.27
DNHD1-219ENST00000533649 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
DNHD1-219ENST00000533649 CUX2O14529 1486 aa16.71■□□□□ 0.27
DNHD1-219ENST00000533649 GTF3C3Q9Y5Q9 886 aa16.7■□□□□ 0.26
DNHD1-219ENST00000533649 YTHDC1Q96MU7 727 aaKnown RBP16.7■□□□□ 0.26
DNHD1-219ENST00000533649 IGF1RP08069 1367 aa16.69■□□□□ 0.26
DNHD1-219ENST00000533649 MIER1Q8N108 512 aa16.69■□□□□ 0.26
DNHD1-219ENST00000533649 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
DNHD1-219ENST00000533649 TOPBP1Q92547 1522 aa16.67■□□□□ 0.26
DNHD1-219ENST00000533649 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
DNHD1-219ENST00000533649 ITGAEP38570 1179 aa16.65■□□□□ 0.26
DNHD1-219ENST00000533649 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
DNHD1-219ENST00000533649 PDS5BQ9NTI5 1447 aa16.63■□□□□ 0.25
DNHD1-219ENST00000533649 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
DNHD1-219ENST00000533649 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms