RNA–Protein interactions for RNA: ENST00000592599.5

SAFB2-211, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 2,260 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-211ENST00000592599 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
SAFB2-211ENST00000592599 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
SAFB2-211ENST00000592599 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
SAFB2-211ENST00000592599 ZCCHC6Q5VYS8 1495 aaKnown RBP26.34■■□□□ 1.81
SAFB2-211ENST00000592599 ABCC9O60706 1549 aa26.34■■□□□ 1.81
SAFB2-211ENST00000592599 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
SAFB2-211ENST00000592599 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
SAFB2-211ENST00000592599 NACADO15069 1562 aa25.57■■□□□ 1.68
SAFB2-211ENST00000592599 MYO15BQ96JP2 1530 aa25.54■■□□□ 1.68
SAFB2-211ENST00000592599 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
SAFB2-211ENST00000592599 SCRIBQ14160 1630 aa25.4■■□□□ 1.66
SAFB2-211ENST00000592599 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
SAFB2-211ENST00000592599 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
SAFB2-211ENST00000592599 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
SAFB2-211ENST00000592599 BICRAQ9NZM4 1560 aa24.74■■□□□ 1.55
SAFB2-211ENST00000592599 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
SAFB2-211ENST00000592599 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
SAFB2-211ENST00000592599 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
SAFB2-211ENST00000592599 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
SAFB2-211ENST00000592599 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
SAFB2-211ENST00000592599 WIZO95785 1651 aa24.2■■□□□ 1.46
SAFB2-211ENST00000592599 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
SAFB2-211ENST00000592599 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
SAFB2-211ENST00000592599 PEG3Q9GZU2 1588 aa23.81■■□□□ 1.4
SAFB2-211ENST00000592599 TOP2AP11388 1531 aaKnown RBP23.8■■□□□ 1.4
SAFB2-211ENST00000592599 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
SAFB2-211ENST00000592599 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
SAFB2-211ENST00000592599 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
SAFB2-211ENST00000592599 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
SAFB2-211ENST00000592599 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
SAFB2-211ENST00000592599 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
SAFB2-211ENST00000592599 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
SAFB2-211ENST00000592599 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
SAFB2-211ENST00000592599 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
SAFB2-211ENST00000592599 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
SAFB2-211ENST00000592599 CFTRP13569 1480 aa23.09■■□□□ 1.29
SAFB2-211ENST00000592599 NESP48681 1621 aa23.09■■□□□ 1.29
SAFB2-211ENST00000592599 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
SAFB2-211ENST00000592599 WRNQ14191 1432 aaPredicted RBP eCLIP22.94■■□□□ 1.26
SAFB2-211ENST00000592599 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
SAFB2-211ENST00000592599 PRDM2Q13029 1718 aa22.92■■□□□ 1.26
SAFB2-211ENST00000592599 SYNJ1O43426 1573 aa22.89■■□□□ 1.26
SAFB2-211ENST00000592599 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
SAFB2-211ENST00000592599 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
SAFB2-211ENST00000592599 CUX1P39880 1505 aa22.78■■□□□ 1.24
SAFB2-211ENST00000592599 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
SAFB2-211ENST00000592599 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
SAFB2-211ENST00000592599 TOP2BQ02880 1626 aa22.73■■□□□ 1.23
SAFB2-211ENST00000592599 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
SAFB2-211ENST00000592599 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
SAFB2-211ENST00000592599 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
SAFB2-211ENST00000592599 SOGA1O94964 1423 aa22.7■■□□□ 1.22
SAFB2-211ENST00000592599 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
SAFB2-211ENST00000592599 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
SAFB2-211ENST00000592599 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
SAFB2-211ENST00000592599 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
SAFB2-211ENST00000592599 FGD5Q6ZNL6 1462 aa22.57■■□□□ 1.2
SAFB2-211ENST00000592599 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
SAFB2-211ENST00000592599 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
SAFB2-211ENST00000592599 RAD54L2Q9Y4B4 1467 aa22.48■■□□□ 1.19
SAFB2-211ENST00000592599 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
SAFB2-211ENST00000592599 MRC2Q9UBG0 1479 aa22.45■■□□□ 1.18
SAFB2-211ENST00000592599 CSRNP3Q8WYN3 585 aa22.45■■□□□ 1.18
SAFB2-211ENST00000592599 CUX2O14529 1486 aa22.4■■□□□ 1.18
SAFB2-211ENST00000592599 EEA1Q15075 1411 aa22.36■■□□□ 1.17
SAFB2-211ENST00000592599 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
SAFB2-211ENST00000592599 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.16
SAFB2-211ENST00000592599 WDR62O43379 1518 aa22.31■■□□□ 1.16
SAFB2-211ENST00000592599 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
SAFB2-211ENST00000592599 ABCA10Q8WWZ4 1543 aa22.27■■□□□ 1.16
SAFB2-211ENST00000592599 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
SAFB2-211ENST00000592599 TARBP1Q13395 1621 aaKnown RBP22.23■■□□□ 1.15
SAFB2-211ENST00000592599 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
SAFB2-211ENST00000592599 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
SAFB2-211ENST00000592599 IGF1RP08069 1367 aa22.21■■□□□ 1.15
SAFB2-211ENST00000592599 AQRO60306 1485 aaKnown RBP eCLIP22.17■■□□□ 1.144e-11■■■□□ 18.5
SAFB2-211ENST00000592599 GOLGA3Q08378 1498 aa22.17■■□□□ 1.14
SAFB2-211ENST00000592599 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
SAFB2-211ENST00000592599 RANGAP1P46060 587 aaPredicted RBP22.15■■□□□ 1.14
SAFB2-211ENST00000592599 KIF21BO75037 1637 aa22.15■■□□□ 1.14
SAFB2-211ENST00000592599 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
SAFB2-211ENST00000592599 PRXQ9BXM0 1461 aa22.13■■□□□ 1.13
SAFB2-211ENST00000592599 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
SAFB2-211ENST00000592599 ABCA5Q8WWZ7 1642 aa22.12■■□□□ 1.13
SAFB2-211ENST00000592599 CARMIL1Q5VZK9 1371 aa22.1■■□□□ 1.13
SAFB2-211ENST00000592599 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
SAFB2-211ENST00000592599 PBRM1Q86U86 1689 aa22.02■■□□□ 1.12
SAFB2-211ENST00000592599 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
SAFB2-211ENST00000592599 EIF4G3O43432 1585 aaKnown RBP22.01■■□□□ 1.11
SAFB2-211ENST00000592599 CEP162Q5TB80 1403 aa22■■□□□ 1.11
SAFB2-211ENST00000592599 CUL7Q14999 1698 aa21.95■■□□□ 1.1
SAFB2-211ENST00000592599 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
SAFB2-211ENST00000592599 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
SAFB2-211ENST00000592599 FBLN2P98095 1184 aa21.87■■□□□ 1.09
SAFB2-211ENST00000592599 CLIP1P30622 1438 aa21.87■■□□□ 1.09
SAFB2-211ENST00000592599 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
SAFB2-211ENST00000592599 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
SAFB2-211ENST00000592599 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
SAFB2-211ENST00000592599 CHMP7Q8WUX9 453 aaPredicted RBP21.78■■□□□ 1.08
SAFB2-211ENST00000592599 P3H3Q8IVL6 736 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms