RNA–Protein interactions for RNA: ENST00000294661.8

C1orf52-201, Transcript of chromosome 1 open reading frame 52, humanhuman

TSL 1 (best)

Gene C1orf52, Length 3,391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52-201ENST00000294661 NISCHQ9Y2I1 1504 aa20.51■□□□□ 0.87
C1orf52-201ENST00000294661 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
C1orf52-201ENST00000294661 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
C1orf52-201ENST00000294661 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
C1orf52-201ENST00000294661 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
C1orf52-201ENST00000294661 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
C1orf52-201ENST00000294661 HRCP23327 699 aa17.22■□□□□ 0.35
C1orf52-201ENST00000294661 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
C1orf52-201ENST00000294661 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
C1orf52-201ENST00000294661 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
C1orf52-201ENST00000294661 PPARGC1BQ86YN6 1023 aaKnown RBP16.99■□□□□ 0.31
C1orf52-201ENST00000294661 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
C1orf52-201ENST00000294661 DCAF1Q9Y4B6 1507 aa16.81■□□□□ 0.28
C1orf52-201ENST00000294661 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
C1orf52-201ENST00000294661 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
C1orf52-201ENST00000294661 ABCC9O60706 1549 aa16.51■□□□□ 0.23
C1orf52-201ENST00000294661 RSF1Q96T23 1441 aaPredicted RBP16.39■□□□□ 0.21
C1orf52-201ENST00000294661 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
C1orf52-201ENST00000294661 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
C1orf52-201ENST00000294661 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
C1orf52-201ENST00000294661 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
C1orf52-201ENST00000294661 FAM9AQ8IZU1 332 aaPredicted RBP16.29■□□□□ 0.2
C1orf52-201ENST00000294661 ZEB1P37275 1124 aaPredicted RBP16.25■□□□□ 0.19
C1orf52-201ENST00000294661 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
C1orf52-201ENST00000294661 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
C1orf52-201ENST00000294661 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
C1orf52-201ENST00000294661 WIZO95785 1651 aa15.96■□□□□ 0.15
C1orf52-201ENST00000294661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
C1orf52-201ENST00000294661 MYT1Q01538 1121 aa15.9■□□□□ 0.14
C1orf52-201ENST00000294661 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
C1orf52-201ENST00000294661 NEUROD1Q13562 356 aa15.86■□□□□ 0.13
C1orf52-201ENST00000294661 GTF3C3Q9Y5Q9 886 aa15.86■□□□□ 0.13
C1orf52-201ENST00000294661 NACADO15069 1562 aa15.85■□□□□ 0.13
C1orf52-201ENST00000294661 CCER1Q8TC90 406 aaPredicted RBP15.85■□□□□ 0.13
C1orf52-201ENST00000294661 ACIN1Q9UKV3 1341 aaKnown RBP15.84■□□□□ 0.13
C1orf52-201ENST00000294661 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
C1orf52-201ENST00000294661 TTBK1Q5TCY1 1321 aaPredicted RBP15.76■□□□□ 0.11
C1orf52-201ENST00000294661 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
C1orf52-201ENST00000294661 CENPBP07199 599 aaPredicted RBP15.74■□□□□ 0.11
C1orf52-201ENST00000294661 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
C1orf52-201ENST00000294661 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.11
C1orf52-201ENST00000294661 WRNQ14191 1432 aaPredicted RBP eCLIP15.7■□□□□ 0.1
C1orf52-201ENST00000294661 YTHDC1Q96MU7 727 aaKnown RBP15.69■□□□□ 0.1
C1orf52-201ENST00000294661 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
C1orf52-201ENST00000294661 SOGA1O94964 1423 aa15.65■□□□□ 0.1
C1orf52-201ENST00000294661 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
C1orf52-201ENST00000294661 SMARCA2P51531 1590 aa15.6■□□□□ 0.09
C1orf52-201ENST00000294661 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
C1orf52-201ENST00000294661 TNIKQ9UKE5 1360 aa15.58■□□□□ 0.08
C1orf52-201ENST00000294661 SMARCA4P51532 1647 aa15.56■□□□□ 0.08
C1orf52-201ENST00000294661 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
C1orf52-201ENST00000294661 UBTFP17480 764 aaKnown RBP15.49■□□□□ 0.07
C1orf52-201ENST00000294661 ZNF316A6NFI3 1004 aaPredicted RBP15.49■□□□□ 0.07
C1orf52-201ENST00000294661 EEA1Q15075 1411 aa15.46■□□□□ 0.07
C1orf52-201ENST00000294661 GOLGA3Q08378 1498 aa15.44■□□□□ 0.06
C1orf52-201ENST00000294661 UNC13AQ9UPW8 1703 aa15.42■□□□□ 0.06
C1orf52-201ENST00000294661 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
C1orf52-201ENST00000294661 MIER1Q8N108 512 aa15.38■□□□□ 0.05
C1orf52-201ENST00000294661 SYNJ1O43426 1573 aa15.33■□□□□ 0.04
C1orf52-201ENST00000294661 CEP164Q9UPV0 1460 aa15.31■□□□□ 0.04
C1orf52-201ENST00000294661 CLIP1P30622 1438 aa15.3■□□□□ 0.04
C1orf52-201ENST00000294661 KIF21BO75037 1637 aa15.29■□□□□ 0.04
C1orf52-201ENST00000294661 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
C1orf52-201ENST00000294661 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
C1orf52-201ENST00000294661 RAPGEF2Q9Y4G8 1499 aa15.24■□□□□ 0.03
C1orf52-201ENST00000294661 BICRAQ9NZM4 1560 aa15.21■□□□□ 0.03
C1orf52-201ENST00000294661 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
C1orf52-201ENST00000294661 PEG3Q9GZU2 1588 aa15.21■□□□□ 0.02
C1orf52-201ENST00000294661 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
C1orf52-201ENST00000294661 APLP2Q06481 763 aa15.14■□□□□ 0.01
C1orf52-201ENST00000294661 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
C1orf52-201ENST00000294661 BCL11AQ9H165 835 aa15.11■□□□□ 0.01
C1orf52-201ENST00000294661 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
C1orf52-201ENST00000294661 ARAP1Q96P48 1450 aa15.06■□□□□ 0
C1orf52-201ENST00000294661 KANK4Q5T7N3 995 aaPredicted RBP15.05■□□□□ 0
C1orf52-201ENST00000294661 TOP2BQ02880 1626 aa15.05■□□□□ -0
C1orf52-201ENST00000294661 CLSPNQ9HAW4 1339 aa15.02■□□□□ -0
C1orf52-201ENST00000294661 SUPT16HQ9Y5B9 1047 aaKnown RBP15.01□□□□□ -0.01
C1orf52-201ENST00000294661 PRXQ9BXM0 1461 aa15□□□□□ -0.01
C1orf52-201ENST00000294661 ANP32EQ9BTT0 268 aa14.99□□□□□ -0.01
C1orf52-201ENST00000294661 BCANQ96GW7 911 aa14.98□□□□□ -0.01
C1orf52-201ENST00000294661 ERICH3Q5RHP9 1530 aa14.98□□□□□ -0.01
C1orf52-201ENST00000294661 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
C1orf52-201ENST00000294661 RRBP1Q9P2E9 1410 aaKnown RBP14.96□□□□□ -0.02
C1orf52-201ENST00000294661 CUX2O14529 1486 aa14.91□□□□□ -0.02
C1orf52-201ENST00000294661 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
C1orf52-201ENST00000294661 TSHZ2Q9NRE2 1034 aa14.9□□□□□ -0.02
C1orf52-201ENST00000294661 CUX1P39880 1505 aa14.89□□□□□ -0.03
C1orf52-201ENST00000294661 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
C1orf52-201ENST00000294661 ITGAEP38570 1179 aa14.87□□□□□ -0.03
C1orf52-201ENST00000294661 ARHGAP35Q9NRY4 1499 aa14.86□□□□□ -0.03
C1orf52-201ENST00000294661 MAPKBP1O60336 1514 aa14.84□□□□□ -0.03
C1orf52-201ENST00000294661 KIF27Q86VH2 1401 aa14.82□□□□□ -0.04
C1orf52-201ENST00000294661 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
C1orf52-201ENST00000294661 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
C1orf52-201ENST00000294661 TIAM1Q13009 1591 aa14.73□□□□□ -0.05
C1orf52-201ENST00000294661 SIN3AQ96ST3 1273 aa14.72□□□□□ -0.05
C1orf52-201ENST00000294661 HMGXB3Q12766 1538 aa14.71□□□□□ -0.05
C1orf52-201ENST00000294661 DDX10Q13206 875 aaKnown RBP14.71□□□□□ -0.06
C1orf52-201ENST00000294661 PHLDB1Q86UU1 1377 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms