RNA–Protein interactions for RNA: ENST00000591310.1

SAFB2-210, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-210ENST00000591310 NISCHQ9Y2I1 1504 aa35.67■■■■□ 3.3
SAFB2-210ENST00000591310 ABCC9O60706 1549 aa32.28■■■□□ 2.76
SAFB2-210ENST00000591310 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
SAFB2-210ENST00000591310 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
SAFB2-210ENST00000591310 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
SAFB2-210ENST00000591310 NACADO15069 1562 aa30.33■■■□□ 2.45
SAFB2-210ENST00000591310 DCAF8L2P0C7V8 631 aa30.18■■■□□ 2.42
SAFB2-210ENST00000591310 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
SAFB2-210ENST00000591310 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
SAFB2-210ENST00000591310 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
SAFB2-210ENST00000591310 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
SAFB2-210ENST00000591310 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
SAFB2-210ENST00000591310 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
SAFB2-210ENST00000591310 SCRIBQ14160 1630 aa29.33■■■□□ 2.29
SAFB2-210ENST00000591310 SHROOM4Q9ULL8 1493 aa29.23■■■□□ 2.27
SAFB2-210ENST00000591310 CC2D2AQ9P2K1 1620 aa29.16■■■□□ 2.26
SAFB2-210ENST00000591310 CECR2Q9BXF3 1484 aa29.05■■■□□ 2.24
SAFB2-210ENST00000591310 EIF4G1Q04637 1599 aaKnown RBP29.04■■■□□ 2.24
SAFB2-210ENST00000591310 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
SAFB2-210ENST00000591310 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
SAFB2-210ENST00000591310 ATAD2BQ9ULI0 1458 aa27.91■■■□□ 2.06
SAFB2-210ENST00000591310 DNAJC5Q9H3Z4 198 aa27.9■■■□□ 2.06
SAFB2-210ENST00000591310 ERCC6Q03468 1493 aa27.86■■■□□ 2.05
SAFB2-210ENST00000591310 SMARCA2P51531 1590 aa27.83■■■□□ 2.05
SAFB2-210ENST00000591310 HMGXB3Q12766 1538 aa27.81■■■□□ 2.04
SAFB2-210ENST00000591310 CUX2O14529 1486 aa27.8■■■□□ 2.04
SAFB2-210ENST00000591310 NESP48681 1621 aa27.7■■■□□ 2.03
SAFB2-210ENST00000591310 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.03
SAFB2-210ENST00000591310 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
SAFB2-210ENST00000591310 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
SAFB2-210ENST00000591310 MROH2BQ7Z745 1585 aa27.53■■■□□ 2
SAFB2-210ENST00000591310 THOC2Q8NI27 1593 aaKnown RBP27.47■■□□□ 1.99
SAFB2-210ENST00000591310 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
SAFB2-210ENST00000591310 KIF21AQ7Z4S6 1674 aa27.4■■□□□ 1.98
SAFB2-210ENST00000591310 WIZO95785 1651 aa27.25■■□□□ 1.95
SAFB2-210ENST00000591310 PDS5BQ9NTI5 1447 aa27.22■■□□□ 1.95
SAFB2-210ENST00000591310 CADPSQ9ULU8 1353 aa27.12■■□□□ 1.93
SAFB2-210ENST00000591310 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
SAFB2-210ENST00000591310 WDR62O43379 1518 aa27■■□□□ 1.91
SAFB2-210ENST00000591310 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
SAFB2-210ENST00000591310 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
SAFB2-210ENST00000591310 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
SAFB2-210ENST00000591310 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
SAFB2-210ENST00000591310 CFTRP13569 1480 aa26.81■■□□□ 1.88
SAFB2-210ENST00000591310 TRIM41Q8WV44 630 aa26.73■■□□□ 1.87
SAFB2-210ENST00000591310 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
SAFB2-210ENST00000591310 PRDM2Q13029 1718 aa26.65■■□□□ 1.86
SAFB2-210ENST00000591310 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
SAFB2-210ENST00000591310 OSCARQ8IYS5 282 aa26.45■■□□□ 1.82
SAFB2-210ENST00000591310 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.82
SAFB2-210ENST00000591310 TOPBP1Q92547 1522 aa26.36■■□□□ 1.81
SAFB2-210ENST00000591310 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
SAFB2-210ENST00000591310 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
SAFB2-210ENST00000591310 RIMBP3CA6NJZ7 1639 aa26.28■■□□□ 1.8
SAFB2-210ENST00000591310 RIMBP3BA6NNM3 1639 aa26.28■■□□□ 1.8
SAFB2-210ENST00000591310 RIMBP3Q9UFD9 1639 aa26.28■■□□□ 1.8
SAFB2-210ENST00000591310 DNMBPQ6XZF7 1577 aa26.26■■□□□ 1.79
SAFB2-210ENST00000591310 ABCC8Q09428 1581 aa26.2■■□□□ 1.79
SAFB2-210ENST00000591310 TARBP1Q13395 1621 aaKnown RBP26.16■■□□□ 1.78
SAFB2-210ENST00000591310 ARHGEF11O15085 1522 aa26.14■■□□□ 1.78
SAFB2-210ENST00000591310 CHD1O14646 1710 aa26.14■■□□□ 1.78
SAFB2-210ENST00000591310 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.774e-11■■■□□ 18.5
SAFB2-210ENST00000591310 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
SAFB2-210ENST00000591310 RAD54L2Q9Y4B4 1467 aa26.01■■□□□ 1.75
SAFB2-210ENST00000591310 FBLN2P98095 1184 aa25.96■■□□□ 1.75
SAFB2-210ENST00000591310 AEBP2Q6ZN18 517 aaPredicted RBP25.96■■□□□ 1.75
SAFB2-210ENST00000591310 SOGA1O94964 1423 aa25.92■■□□□ 1.74
SAFB2-210ENST00000591310 TDRD9Q8NDG6 1382 aaKnown RBP25.92■■□□□ 1.74
SAFB2-210ENST00000591310 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
SAFB2-210ENST00000591310 CYB5RLQ6IPT4 315 aa25.9■■□□□ 1.74
SAFB2-210ENST00000591310 ARAP1Q96P48 1450 aa25.89■■□□□ 1.73
SAFB2-210ENST00000591310 CUX1P39880 1505 aa25.88■■□□□ 1.73
SAFB2-210ENST00000591310 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
SAFB2-210ENST00000591310 WDR97A6NE52 1622 aa25.82■■□□□ 1.72
SAFB2-210ENST00000591310 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
SAFB2-210ENST00000591310 PBRM1Q86U86 1689 aa25.74■■□□□ 1.71
SAFB2-210ENST00000591310 MAGI1Q96QZ7 1491 aaPredicted RBP25.73■■□□□ 1.71
SAFB2-210ENST00000591310 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
SAFB2-210ENST00000591310 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
SAFB2-210ENST00000591310 TRHP20396 242 aaPredicted RBP25.69■■□□□ 1.7
SAFB2-210ENST00000591310 CHMP7Q8WUX9 453 aaPredicted RBP25.69■■□□□ 1.7
SAFB2-210ENST00000591310 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
SAFB2-210ENST00000591310 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
SAFB2-210ENST00000591310 ABCA5Q8WWZ7 1642 aa25.61■■□□□ 1.69
SAFB2-210ENST00000591310 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
SAFB2-210ENST00000591310 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
SAFB2-210ENST00000591310 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.66
SAFB2-210ENST00000591310 ADAMTS12P58397 1594 aa25.44■■□□□ 1.66
SAFB2-210ENST00000591310 GRIN2AQ12879 1464 aa25.42■■□□□ 1.66
SAFB2-210ENST00000591310 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
SAFB2-210ENST00000591310 ERCC6L2Q5T890 1561 aa25.41■■□□□ 1.66
SAFB2-210ENST00000591310 WRNQ14191 1432 aaPredicted RBP eCLIP25.41■■□□□ 1.66
SAFB2-210ENST00000591310 CEP170Q5SW79 1584 aa25.39■■□□□ 1.66
SAFB2-210ENST00000591310 NUP160Q12769 1436 aa25.3■■□□□ 1.64
SAFB2-210ENST00000591310 FHAD1B1AJZ9 1412 aa25.27■■□□□ 1.64
SAFB2-210ENST00000591310 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
SAFB2-210ENST00000591310 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
SAFB2-210ENST00000591310 RUSC2Q8N2Y8 1516 aa25.1■■□□□ 1.61
SAFB2-210ENST00000591310 PRG4Q92954 1404 aaPredicted RBP25.09■■□□□ 1.61
SAFB2-210ENST00000591310 KIF13AQ9H1H9 1805 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms