RNA–Protein interactions for RNA: ENST00000498576.1

EXOSC10-211, Transcript of exosome component 10, humanhuman

TSL 4

Gene EXOSC10, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-211ENST00000498576 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
EXOSC10-211ENST00000498576 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
EXOSC10-211ENST00000498576 ABCC9O60706 1549 aa20.34■□□□□ 0.85
EXOSC10-211ENST00000498576 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
EXOSC10-211ENST00000498576 NACADO15069 1562 aa19.53■□□□□ 0.72
EXOSC10-211ENST00000498576 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
EXOSC10-211ENST00000498576 DCAF8L2P0C7V8 631 aa19.47■□□□□ 0.71
EXOSC10-211ENST00000498576 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
EXOSC10-211ENST00000498576 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
EXOSC10-211ENST00000498576 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
EXOSC10-211ENST00000498576 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
EXOSC10-211ENST00000498576 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
EXOSC10-211ENST00000498576 SCRIBQ14160 1630 aa18.98■□□□□ 0.63
EXOSC10-211ENST00000498576 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
EXOSC10-211ENST00000498576 SHROOM4Q9ULL8 1493 aa18.73■□□□□ 0.59
EXOSC10-211ENST00000498576 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
EXOSC10-211ENST00000498576 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
EXOSC10-211ENST00000498576 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
EXOSC10-211ENST00000498576 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
EXOSC10-211ENST00000498576 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
EXOSC10-211ENST00000498576 BAZ1AQ9NRL2 1556 aaPredicted RBP18.11■□□□□ 0.49
EXOSC10-211ENST00000498576 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
EXOSC10-211ENST00000498576 ATAD2BQ9ULI0 1458 aa18.08■□□□□ 0.49
EXOSC10-211ENST00000498576 AEBP2Q6ZN18 517 aaPredicted RBP18.06■□□□□ 0.48
EXOSC10-211ENST00000498576 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
EXOSC10-211ENST00000498576 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
EXOSC10-211ENST00000498576 SMARCA2P51531 1590 aa18■□□□□ 0.47
EXOSC10-211ENST00000498576 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
EXOSC10-211ENST00000498576 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
EXOSC10-211ENST00000498576 WIZO95785 1651 aa17.88■□□□□ 0.45
EXOSC10-211ENST00000498576 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
EXOSC10-211ENST00000498576 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
EXOSC10-211ENST00000498576 NESP48681 1621 aa17.65■□□□□ 0.42
EXOSC10-211ENST00000498576 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
EXOSC10-211ENST00000498576 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.39
EXOSC10-211ENST00000498576 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
EXOSC10-211ENST00000498576 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
EXOSC10-211ENST00000498576 CFTRP13569 1480 aa17.44■□□□□ 0.38
EXOSC10-211ENST00000498576 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
EXOSC10-211ENST00000498576 PDS5BQ9NTI5 1447 aa17.39■□□□□ 0.38
EXOSC10-211ENST00000498576 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
EXOSC10-211ENST00000498576 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
EXOSC10-211ENST00000498576 CUX2O14529 1486 aa17.31■□□□□ 0.36
EXOSC10-211ENST00000498576 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
EXOSC10-211ENST00000498576 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
EXOSC10-211ENST00000498576 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
EXOSC10-211ENST00000498576 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
EXOSC10-211ENST00000498576 WDR62O43379 1518 aa17.21■□□□□ 0.35
EXOSC10-211ENST00000498576 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
EXOSC10-211ENST00000498576 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
EXOSC10-211ENST00000498576 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
EXOSC10-211ENST00000498576 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
EXOSC10-211ENST00000498576 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
EXOSC10-211ENST00000498576 CUX1P39880 1505 aa16.96■□□□□ 0.31
EXOSC10-211ENST00000498576 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
EXOSC10-211ENST00000498576 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
EXOSC10-211ENST00000498576 ZNF608Q9ULD9 1512 aaPredicted RBP16.9■□□□□ 0.3
EXOSC10-211ENST00000498576 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
EXOSC10-211ENST00000498576 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
EXOSC10-211ENST00000498576 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
EXOSC10-211ENST00000498576 SOGA1O94964 1423 aa16.81■□□□□ 0.28
EXOSC10-211ENST00000498576 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
EXOSC10-211ENST00000498576 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
EXOSC10-211ENST00000498576 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
EXOSC10-211ENST00000498576 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
EXOSC10-211ENST00000498576 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
EXOSC10-211ENST00000498576 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.28
EXOSC10-211ENST00000498576 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
EXOSC10-211ENST00000498576 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
EXOSC10-211ENST00000498576 ABCA10Q8WWZ4 1543 aa16.7■□□□□ 0.26
EXOSC10-211ENST00000498576 ABCA5Q8WWZ7 1642 aa16.65■□□□□ 0.26
EXOSC10-211ENST00000498576 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
EXOSC10-211ENST00000498576 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
EXOSC10-211ENST00000498576 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
EXOSC10-211ENST00000498576 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
EXOSC10-211ENST00000498576 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
EXOSC10-211ENST00000498576 CHD1O14646 1710 aa16.58■□□□□ 0.24
EXOSC10-211ENST00000498576 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
EXOSC10-211ENST00000498576 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
EXOSC10-211ENST00000498576 FBLN2P98095 1184 aa16.48■□□□□ 0.23
EXOSC10-211ENST00000498576 ERICH3Q5RHP9 1530 aa16.48■□□□□ 0.23
EXOSC10-211ENST00000498576 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
EXOSC10-211ENST00000498576 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
EXOSC10-211ENST00000498576 IGF1RP08069 1367 aa16.43■□□□□ 0.22
EXOSC10-211ENST00000498576 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
EXOSC10-211ENST00000498576 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
EXOSC10-211ENST00000498576 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
EXOSC10-211ENST00000498576 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
EXOSC10-211ENST00000498576 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
EXOSC10-211ENST00000498576 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
EXOSC10-211ENST00000498576 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
EXOSC10-211ENST00000498576 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
EXOSC10-211ENST00000498576 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
EXOSC10-211ENST00000498576 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
EXOSC10-211ENST00000498576 NUP160Q12769 1436 aa16.36■□□□□ 0.21
EXOSC10-211ENST00000498576 CEP170Q5SW79 1584 aa16.36■□□□□ 0.21
EXOSC10-211ENST00000498576 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
EXOSC10-211ENST00000498576 CUL7Q14999 1698 aa16.3■□□□□ 0.2
EXOSC10-211ENST00000498576 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
EXOSC10-211ENST00000498576 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms