RNA–Protein interactions for RNA: ENST00000525551.1

FDFT1-205, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-205ENST00000525551 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
FDFT1-205ENST00000525551 ABCC9O60706 1549 aa31.11■■■□□ 2.57
FDFT1-205ENST00000525551 CCDC180Q9P1Z9 1646 aa30.06■■■□□ 2.4
FDFT1-205ENST00000525551 DNAJC5BQ9UF47 199 aa30.05■■■□□ 2.4
FDFT1-205ENST00000525551 RB1CC1Q8TDY2 1594 aa29.15■■■□□ 2.26
FDFT1-205ENST00000525551 PABPN1Q86U42 306 aaKnown RBP eCLIP28.88■■■□□ 2.21
FDFT1-205ENST00000525551 NACADO15069 1562 aa28.71■■■□□ 2.19
FDFT1-205ENST00000525551 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
FDFT1-205ENST00000525551 UNC13AQ9UPW8 1703 aa28.41■■■□□ 2.14
FDFT1-205ENST00000525551 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
FDFT1-205ENST00000525551 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
FDFT1-205ENST00000525551 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
FDFT1-205ENST00000525551 CC2D2AQ9P2K1 1620 aa28■■■□□ 2.07
FDFT1-205ENST00000525551 MYO15BQ96JP2 1530 aa27.95■■■□□ 2.06
FDFT1-205ENST00000525551 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
FDFT1-205ENST00000525551 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.03
FDFT1-205ENST00000525551 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
FDFT1-205ENST00000525551 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
FDFT1-205ENST00000525551 ZCCHC6Q5VYS8 1495 aaKnown RBP27.2■■□□□ 1.95
FDFT1-205ENST00000525551 CUX2O14529 1486 aa27.16■■□□□ 1.94
FDFT1-205ENST00000525551 ERCC6Q03468 1493 aa26.95■■□□□ 1.91
FDFT1-205ENST00000525551 TRIM41Q8WV44 630 aa26.74■■□□□ 1.87
FDFT1-205ENST00000525551 NCAPD3P42695 1498 aa26.54■■□□□ 1.84
FDFT1-205ENST00000525551 NESP48681 1621 aa26.43■■□□□ 1.82
FDFT1-205ENST00000525551 ATAD2BQ9ULI0 1458 aa26.31■■□□□ 1.8
FDFT1-205ENST00000525551 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
FDFT1-205ENST00000525551 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
FDFT1-205ENST00000525551 SMARCA2P51531 1590 aa26.18■■□□□ 1.78
FDFT1-205ENST00000525551 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
FDFT1-205ENST00000525551 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
FDFT1-205ENST00000525551 SMARCA4P51532 1647 aa26.01■■□□□ 1.75
FDFT1-205ENST00000525551 PDS5BQ9NTI5 1447 aa26.01■■□□□ 1.75
FDFT1-205ENST00000525551 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
FDFT1-205ENST00000525551 OSCARQ8IYS5 282 aa25.89■■□□□ 1.74
FDFT1-205ENST00000525551 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
FDFT1-205ENST00000525551 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
FDFT1-205ENST00000525551 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
FDFT1-205ENST00000525551 WDR62O43379 1518 aa25.73■■□□□ 1.71
FDFT1-205ENST00000525551 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
FDFT1-205ENST00000525551 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
FDFT1-205ENST00000525551 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
FDFT1-205ENST00000525551 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
FDFT1-205ENST00000525551 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
FDFT1-205ENST00000525551 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
FDFT1-205ENST00000525551 TRHP20396 242 aaPredicted RBP25.42■■□□□ 1.66
FDFT1-205ENST00000525551 FANCD2Q9BXW9 1451 aa25.41■■□□□ 1.66
FDFT1-205ENST00000525551 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
FDFT1-205ENST00000525551 CYB5RLQ6IPT4 315 aa25.36■■□□□ 1.65
FDFT1-205ENST00000525551 ARHGEF11O15085 1522 aa25.36■■□□□ 1.65
FDFT1-205ENST00000525551 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
FDFT1-205ENST00000525551 CFTRP13569 1480 aa25.19■■□□□ 1.62
FDFT1-205ENST00000525551 WIZO95785 1651 aa25.16■■□□□ 1.62
FDFT1-205ENST00000525551 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
FDFT1-205ENST00000525551 IFT140Q96RY7 1462 aa25.04■■□□□ 1.6
FDFT1-205ENST00000525551 ARAP1Q96P48 1450 aa25.03■■□□□ 1.6
FDFT1-205ENST00000525551 FBLN2P98095 1184 aa24.93■■□□□ 1.58
FDFT1-205ENST00000525551 RSF1Q96T23 1441 aaPredicted RBP24.89■■□□□ 1.58
FDFT1-205ENST00000525551 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
FDFT1-205ENST00000525551 CHD1O14646 1710 aa24.86■■□□□ 1.57
FDFT1-205ENST00000525551 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
FDFT1-205ENST00000525551 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.56
FDFT1-205ENST00000525551 PRDM2Q13029 1718 aa24.76■■□□□ 1.55
FDFT1-205ENST00000525551 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
FDFT1-205ENST00000525551 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
FDFT1-205ENST00000525551 TARBP1Q13395 1621 aaKnown RBP24.62■■□□□ 1.53
FDFT1-205ENST00000525551 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
FDFT1-205ENST00000525551 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
FDFT1-205ENST00000525551 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
FDFT1-205ENST00000525551 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
FDFT1-205ENST00000525551 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
FDFT1-205ENST00000525551 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
FDFT1-205ENST00000525551 POLA1P09884 1462 aaPredicted RBP24.48■■□□□ 1.51
FDFT1-205ENST00000525551 SNAPC4Q5SXM2 1469 aa24.47■■□□□ 1.51
FDFT1-205ENST00000525551 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.51
FDFT1-205ENST00000525551 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
FDFT1-205ENST00000525551 SOGA1O94964 1423 aa24.43■■□□□ 1.5
FDFT1-205ENST00000525551 ILDR1Q86SU0 546 aaPredicted RBP24.37■■□□□ 1.49
FDFT1-205ENST00000525551 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
FDFT1-205ENST00000525551 SYNJ2O15056 1496 aa24.3■■□□□ 1.48
FDFT1-205ENST00000525551 GRIN2BQ13224 1484 aa24.28■■□□□ 1.48
FDFT1-205ENST00000525551 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
FDFT1-205ENST00000525551 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
FDFT1-205ENST00000525551 ERCC6L2Q5T890 1561 aa24.12■■□□□ 1.45
FDFT1-205ENST00000525551 KDM4FA0A1W2PPD8 638 aa24.09■■□□□ 1.45
FDFT1-205ENST00000525551 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
FDFT1-205ENST00000525551 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
FDFT1-205ENST00000525551 CUX1P39880 1505 aa24.01■■□□□ 1.43
FDFT1-205ENST00000525551 FAM69CQ0P6D2 419 aa24.01■■□□□ 1.43
FDFT1-205ENST00000525551 CEP170Q5SW79 1584 aa24■■□□□ 1.43
FDFT1-205ENST00000525551 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
FDFT1-205ENST00000525551 NPM1P06748 294 aaKnown RBP eCLIP23.9■■□□□ 1.42
FDFT1-205ENST00000525551 NUP160Q12769 1436 aa23.89■■□□□ 1.41
FDFT1-205ENST00000525551 ABCC10Q5T3U5 1492 aa23.88■■□□□ 1.41
FDFT1-205ENST00000525551 ABCA5Q8WWZ7 1642 aa23.87■■□□□ 1.41
FDFT1-205ENST00000525551 ABCA10Q8WWZ4 1543 aa23.86■■□□□ 1.41
FDFT1-205ENST00000525551 SHROOM2Q13796 1616 aa23.85■■□□□ 1.41
FDFT1-205ENST00000525551 KDM6BO15054 1643 aa23.84■■□□□ 1.41
FDFT1-205ENST00000525551 PRG4Q92954 1404 aaPredicted RBP23.81■■□□□ 1.4
FDFT1-205ENST00000525551 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
FDFT1-205ENST00000525551 JPH4Q96JJ6 628 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms