Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.978e-22■□□□□ 10.3
DKC1O60832 LINC02001-201ENST00000592381 1298 ntTSL 216.86■□□□□ 0.295e-14■□□□□ 10.2
DKC1O60832 LINC02001-202ENST00000638682 1504 ntTSL 5 BASIC12.36□□□□□ -0.435e-14■□□□□ 10.2
DKC1O60832 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.345e-9■□□□□ 10.2
DKC1O60832 COL27A1-207ENST00000494090 5329 ntTSL 1 (best)21.5■■□□□ 1.037e-7■□□□□ 10.2
DKC1O60832 ZFPM1-202ENST00000562417 497 ntTSL 319.86■□□□□ 0.777e-7■□□□□ 10.2
DKC1O60832 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.647e-7■□□□□ 10.2
DKC1O60832 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.14■□□□□ 0.497e-7■□□□□ 10.2
DKC1O60832 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.247e-7■□□□□ 10.2
DKC1O60832 KPNB1-212ENST00000582126 653 ntTSL 515.94■□□□□ 0.144e-13■□□□□ 10.2
DKC1O60832 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.644e-13■□□□□ 10.2
DKC1O60832 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.687e-7■□□□□ 10.2
DKC1O60832 RPL3-207ENST00000459859 447 ntTSL 322.42■■□□□ 1.181e-15■□□□□ 10.2
DKC1O60832 RPL3-218ENST00000498462 669 ntTSL 320.93■□□□□ 0.941e-15■□□□□ 10.2
DKC1O60832 RPL3-208ENST00000460589 630 ntTSL 218.97■□□□□ 0.631e-15■□□□□ 10.2
DKC1O60832 RPL3-205ENST00000427905 782 ntTSL 515.91■□□□□ 0.141e-15■□□□□ 10.2
DKC1O60832 RPL3-209ENST00000461967 767 ntTSL 214.69□□□□□ -0.061e-15■□□□□ 10.2
DKC1O60832 RPL3-217ENST00000484615 827 ntTSL 214.54□□□□□ -0.081e-15■□□□□ 10.2
DKC1O60832 RPL3-204ENST00000420536 711 ntTSL 510.37□□□□□ -0.751e-15■□□□□ 10.2
DKC1O60832 SLC43A1-202ENST00000524995 953 ntTSL 322.13■■□□□ 1.135e-9■□□□□ 10.1
DKC1O60832 SLC43A1-207ENST00000533066 999 ntTSL 320.15■□□□□ 0.825e-9■□□□□ 10.1
DKC1O60832 SLC43A1-210ENST00000534105 580 ntTSL 519.83■□□□□ 0.775e-9■□□□□ 10.1
DKC1O60832 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.65e-9■□□□□ 10.1
DKC1O60832 SLC43A1-206ENST00000530159 788 ntTSL 518.29■□□□□ 0.525e-9■□□□□ 10.1
DKC1O60832 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.365e-9■□□□□ 10.1
DKC1O60832 SLC43A1-203ENST00000525764 556 ntTSL 314.72□□□□□ -0.055e-9■□□□□ 10.1
DKC1O60832 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.851e-15■□□□□ 10.1
DKC1O60832 ZNF692-208ENST00000470787 1544 ntTSL 225.09■■□□□ 1.611e-15■□□□□ 10.1
DKC1O60832 ZNF692-203ENST00000412341 1916 ntTSL 524.73■■□□□ 1.551e-15■□□□□ 10.1
DKC1O60832 ZNF692-220ENST00000496411 1064 ntTSL 323.64■■□□□ 1.371e-15■□□□□ 10.1
DKC1O60832 ZNF692-211ENST00000477070 1521 ntTSL 523.42■■□□□ 1.341e-15■□□□□ 10.1
DKC1O60832 ZNF692-212ENST00000478107 1051 ntTSL 523.01■■□□□ 1.271e-15■□□□□ 10.1
DKC1O60832 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.051e-15■□□□□ 10.1
DKC1O60832 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.831e-15■□□□□ 10.1
DKC1O60832 ZNF692-207ENST00000468455 644 ntTSL 520.15■□□□□ 0.821e-15■□□□□ 10.1
DKC1O60832 ZNF692-214ENST00000483223 901 ntTSL 320.05■□□□□ 0.81e-15■□□□□ 10.1
DKC1O60832 ZNF692-227ENST00000533927 2026 ntTSL 1 (best)19.91■□□□□ 0.781e-15■□□□□ 10.1
DKC1O60832 ZNF692-206ENST00000463519 2704 ntTSL 1 (best)15.55■□□□□ 0.081e-15■□□□□ 10.1
DKC1O60832 ZNF692-216ENST00000491971 805 ntTSL 214.04□□□□□ -0.161e-15■□□□□ 10.1
DKC1O60832 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.242e-6■□□□□ 10.1
DKC1O60832 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.472e-6■□□□□ 10.1
DKC1O60832 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.34□□□□□ -1.232e-6■□□□□ 10.1
DKC1O60832 WDR43-201ENST00000296126 787 ntTSL 53.92□□□□□ -1.781e-323■□□□□ 10.1
DKC1O60832 WDR43-204ENST00000440983 541 ntTSL 43.92□□□□□ -1.781e-323■□□□□ 10.1
DKC1O60832 SNORD92-201ENST00000585078 85 ntBASIC0.36□□□□□ -2.351e-323■□□□□ 10.1
DKC1O60832 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.251e-46■□□□□ 10
DKC1O60832 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.19■□□□□ 0.824e-6■□□□□ 10
DKC1O60832 HYOU1-215ENST00000543287 2464 ntTSL 218.56■□□□□ 0.564e-6■□□□□ 10
DKC1O60832 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.93■□□□□ 0.144e-6■□□□□ 10
DKC1O60832 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.64■□□□□ 0.094e-6■□□□□ 10
DKC1O60832 HYOU1-207ENST00000530473 2023 ntTSL 515.5■□□□□ 0.074e-6■□□□□ 10
DKC1O60832 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.134e-6■□□□□ 10
DKC1O60832 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC13.4□□□□□ -0.264e-6■□□□□ 10
DKC1O60832 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC13.4□□□□□ -0.264e-6■□□□□ 10
DKC1O60832 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.088e-10■□□□□ 10
DKC1O60832 INSR-206ENST00000600492 653 ntTSL 511.56□□□□□ -0.568e-10■□□□□ 10
DKC1O60832 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC11.22□□□□□ -0.618e-10■□□□□ 10
DKC1O60832 AFP-206ENST00000514279 693 ntTSL 26.88□□□□□ -1.318e-73■□□□□ 10
DKC1O60832 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.328e-73■□□□□ 10
DKC1O60832 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.37□□□□□ -1.398e-73■□□□□ 10
DKC1O60832 AFP-204ENST00000508838 728 ntTSL 26□□□□□ -1.458e-73■□□□□ 10
DKC1O60832 AHSG-202ENST00000411641 1711 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.531e-323■□□□□ 9.9
DKC1O60832 AHSG-201ENST00000273784 1553 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.541e-323■□□□□ 9.9
DKC1O60832 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.51■□□□□ 0.873e-6■□□□□ 9.9
DKC1O60832 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.613e-6■□□□□ 9.9
DKC1O60832 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.013e-6■□□□□ 9.9
DKC1O60832 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC13.6□□□□□ -0.233e-6■□□□□ 9.9
DKC1O60832 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.233e-6■□□□□ 9.9
DKC1O60832 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC12.17□□□□□ -0.463e-6■□□□□ 9.9
DKC1O60832 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.221e-323■□□□□ 9.9
DKC1O60832 FN1-214ENST00000460217 804 ntTSL 212.01□□□□□ -0.494e-41■□□□□ 9.9
DKC1O60832 FN1-210ENST00000438981 723 ntTSL 28.94□□□□□ -0.984e-41■□□□□ 9.9
DKC1O60832 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.253e-8■□□□□ 9.9
DKC1O60832 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC11.11□□□□□ -0.633e-8■□□□□ 9.9
DKC1O60832 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC14.35□□□□□ -0.112e-32■□□□□ 9.9
DKC1O60832 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC13.99□□□□□ -0.172e-32■□□□□ 9.9
DKC1O60832 FN1-206ENST00000359671 8524 ntTSL 5 BASIC13.74□□□□□ -0.212e-32■□□□□ 9.9
DKC1O60832 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC13.38□□□□□ -0.272e-32■□□□□ 9.9
DKC1O60832 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC12.9□□□□□ -0.342e-32■□□□□ 9.9
DKC1O60832 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC12.75□□□□□ -0.372e-32■□□□□ 9.9
DKC1O60832 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC12.68□□□□□ -0.382e-32■□□□□ 9.9
DKC1O60832 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC12.53□□□□□ -0.42e-32■□□□□ 9.9
DKC1O60832 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.462e-32■□□□□ 9.9
DKC1O60832 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC11.32□□□□□ -0.62e-32■□□□□ 9.9
DKC1O60832 GRN-205ENST00000586443 1557 ntTSL 320.9■□□□□ 0.941e-6■□□□□ 9.8
DKC1O60832 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.74■□□□□ 0.431e-6■□□□□ 9.8
DKC1O60832 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.261e-6■□□□□ 9.8
DKC1O60832 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.52■□□□□ 0.241e-6■□□□□ 9.8
DKC1O60832 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.09■□□□□ 0.655e-11■□□□□ 9.8
DKC1O60832 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.525e-11■□□□□ 9.8
DKC1O60832 PAPD5-204ENST00000562717 1866 ntTSL 515.94■□□□□ 0.145e-11■□□□□ 9.8
DKC1O60832 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC8.28□□□□□ -1.081e-323■□□□□ 9.8
DKC1O60832 RNU4ATAC-201ENST00000580972 127 ntBASIC6.77□□□□□ -1.331e-323■□□□□ 9.8
DKC1O60832 RPL13A-206ENST00000476268 1623 ntTSL 319.98■□□□□ 0.791e-323■□□□□ 9.7
DKC1O60832 RPL13A-208ENST00000477613 796 ntTSL 519.69■□□□□ 0.741e-323■□□□□ 9.7
DKC1O60832 RPL13A-209ENST00000479992 850 ntTSL 317.91■□□□□ 0.461e-323■□□□□ 9.7
DKC1O60832 RPL13A-204ENST00000472481 728 ntTSL 217.04■□□□□ 0.321e-323■□□□□ 9.7
DKC1O60832 RPL13A-202ENST00000467825 660 ntTSL 516.84■□□□□ 0.291e-323■□□□□ 9.7
DKC1O60832 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)16.82■□□□□ 0.281e-323■□□□□ 9.7
DKC1O60832 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.141e-323■□□□□ 9.7
Retrieved 100 of 8,567 protein–RNA pairs in 65.4 ms