RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 DCAF8L2P0C7V8 631 aa17.96■□□□□ 0.47
FN1-209ENST00000432072 NISCHQ9Y2I1 1504 aa16.51■□□□□ 0.23
FN1-209ENST00000432072 SUPT5HO00267 1087 aaKnown RBP16.3■□□□□ 0.2
FN1-209ENST00000432072 FAM9AQ8IZU1 332 aaPredicted RBP16.25■□□□□ 0.19
FN1-209ENST00000432072 SHROOM4Q9ULL8 1493 aa16.17■□□□□ 0.18
FN1-209ENST00000432072 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
FN1-209ENST00000432072 APLP2Q06481 763 aa15.9■□□□□ 0.14
FN1-209ENST00000432072 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
FN1-209ENST00000432072 RANGAP1P46060 587 aaPredicted RBP15.55■□□□□ 0.08
FN1-209ENST00000432072 TTBK1Q5TCY1 1321 aaPredicted RBP15.4■□□□□ 0.06
FN1-209ENST00000432072 MYT1LQ9UL68 1186 aa15.37■□□□□ 0.05
FN1-209ENST00000432072 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
FN1-209ENST00000432072 UBTFP17480 764 aaKnown RBP15.2■□□□□ 0.02
FN1-209ENST00000432072 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
FN1-209ENST00000432072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
FN1-209ENST00000432072 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
FN1-209ENST00000432072 CHIC1Q5VXU3 224 aa15.04■□□□□ -0
FN1-209ENST00000432072 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
FN1-209ENST00000432072 ABCC9O60706 1549 aa14.93□□□□□ -0.02
FN1-209ENST00000432072 CCER1Q8TC90 406 aaPredicted RBP14.81□□□□□ -0.04
FN1-209ENST00000432072 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
FN1-209ENST00000432072 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
FN1-209ENST00000432072 FBLN2P98095 1184 aa14.72□□□□□ -0.05
FN1-209ENST00000432072 POLR3GLQ9BT43 218 aa14.7□□□□□ -0.06
FN1-209ENST00000432072 ITGAEP38570 1179 aa14.69□□□□□ -0.06
FN1-209ENST00000432072 ERICH6Q7L0X2 663 aa14.62□□□□□ -0.07
FN1-209ENST00000432072 PPARGC1BQ86YN6 1023 aaKnown RBP14.58□□□□□ -0.08
FN1-209ENST00000432072 BCANQ96GW7 911 aa14.54□□□□□ -0.08
FN1-209ENST00000432072 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.09
FN1-209ENST00000432072 NEFLP07196 543 aa14.51□□□□□ -0.09
FN1-209ENST00000432072 CNGB1Q14028 1251 aaPredicted RBP14.46□□□□□ -0.1
FN1-209ENST00000432072 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
FN1-209ENST00000432072 ESF1Q9H501 851 aaKnown RBP14.43□□□□□ -0.1
FN1-209ENST00000432072 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
FN1-209ENST00000432072 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
FN1-209ENST00000432072 SLC24A1O60721 1099 aa14.34□□□□□ -0.11
FN1-209ENST00000432072 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
FN1-209ENST00000432072 TRIM52Q96A61 297 aa14.33□□□□□ -0.12
FN1-209ENST00000432072 DAXXQ9UER7 740 aaPredicted RBP14.28□□□□□ -0.12
FN1-209ENST00000432072 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.13
FN1-209ENST00000432072 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
FN1-209ENST00000432072 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
FN1-209ENST00000432072 ARID3CA6NKF2 412 aa14.18□□□□□ -0.14
FN1-209ENST00000432072 ZNF326Q5BKZ1 582 aaKnown RBP14.13□□□□□ -0.15
FN1-209ENST00000432072 ZNF777Q9ULD5 760 aaPredicted RBP14.11□□□□□ -0.15
FN1-209ENST00000432072 TRIM26Q12899 539 aaPredicted RBP14.1□□□□□ -0.15
FN1-209ENST00000432072 NEFMP07197 916 aa14.1□□□□□ -0.15
FN1-209ENST00000432072 P3H3Q8IVL6 736 aa14.1□□□□□ -0.15
FN1-209ENST00000432072 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
FN1-209ENST00000432072 CLSPNQ9HAW4 1339 aa14.08□□□□□ -0.15
FN1-209ENST00000432072 LOC105371045A0A1W2PR82 267 aa14.07□□□□□ -0.16
FN1-209ENST00000432072 ZBTB47Q9UFB7 747 aaPredicted RBP14.07□□□□□ -0.16
FN1-209ENST00000432072 NEUROD1Q13562 356 aa14.05□□□□□ -0.16
FN1-209ENST00000432072 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
FN1-209ENST00000432072 CCDC180Q9P1Z9 1646 aa14.02□□□□□ -0.17
FN1-209ENST00000432072 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
FN1-209ENST00000432072 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
FN1-209ENST00000432072 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
FN1-209ENST00000432072 BCL11AQ9H165 835 aa13.94□□□□□ -0.18
FN1-209ENST00000432072 ERCC6Q03468 1493 aa13.93□□□□□ -0.18
FN1-209ENST00000432072 A0A0G2JS52 829 aa13.93□□□□□ -0.18
FN1-209ENST00000432072 ARID4BQ4LE39 1312 aaPredicted RBP13.9□□□□□ -0.18
FN1-209ENST00000432072 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
FN1-209ENST00000432072 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
FN1-209ENST00000432072 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
FN1-209ENST00000432072 C14orf37Q86TY3 774 aa13.86□□□□□ -0.19
FN1-209ENST00000432072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.83□□□□□ -0.2
FN1-209ENST00000432072 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
FN1-209ENST00000432072 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
FN1-209ENST00000432072 KCNH8Q96L42 1107 aa13.75□□□□□ -0.21
FN1-209ENST00000432072 NPM2Q86SE8 214 aaKnown RBP13.74□□□□□ -0.21
FN1-209ENST00000432072 PPP1R15AO75807 674 aaPredicted RBP13.73□□□□□ -0.21
FN1-209ENST00000432072 ANP32CO43423 234 aa13.73□□□□□ -0.21
FN1-209ENST00000432072 ZBTB7CA1YPR0 619 aa13.72□□□□□ -0.21
FN1-209ENST00000432072 TSPY4P0CV99 314 aa13.7□□□□□ -0.22
FN1-209ENST00000432072 TSPY10P0CW01 314 aa13.7□□□□□ -0.22
FN1-209ENST00000432072 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
FN1-209ENST00000432072 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
FN1-209ENST00000432072 NACADO15069 1562 aa13.64□□□□□ -0.23
FN1-209ENST00000432072 HRCP23327 699 aa13.64□□□□□ -0.23
FN1-209ENST00000432072 MYT1Q01538 1121 aa13.63□□□□□ -0.23
FN1-209ENST00000432072 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
FN1-209ENST00000432072 CHIC2Q9UKJ5 165 aa13.58□□□□□ -0.24
FN1-209ENST00000432072 BAZ1BQ9UIG0 1483 aaKnown RBP13.57□□□□□ -0.24
FN1-209ENST00000432072 PLEKHD1A6NEE1 506 aa13.57□□□□□ -0.24
FN1-209ENST00000432072 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
FN1-209ENST00000432072 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
FN1-209ENST00000432072 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
FN1-209ENST00000432072 ARXQ96QS3 562 aa13.52□□□□□ -0.25
FN1-209ENST00000432072 TONSLQ96HA7 1378 aa13.52□□□□□ -0.25
FN1-209ENST00000432072 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
FN1-209ENST00000432072 NPHP1O15259 732 aa13.51□□□□□ -0.25
FN1-209ENST00000432072 LMOD2Q6P5Q4 547 aa13.51□□□□□ -0.25
FN1-209ENST00000432072 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
FN1-209ENST00000432072 MLECQ14165 292 aa13.44□□□□□ -0.26
FN1-209ENST00000432072 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
FN1-209ENST00000432072 WDR43Q15061 677 aaKnown RBP eCLIP13.41□□□□□ -0.26
FN1-209ENST00000432072 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
FN1-209ENST00000432072 EIF4G1Q04637 1599 aaKnown RBP13.39□□□□□ -0.27
FN1-209ENST00000432072 HSP90AA1P07900 732 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms