RNA–Protein interactions for RNA: ENST00000524995.5

SLC43A1-202, Transcript of solute carrier family 43 member 1, humanhuman

TSL 3

Gene SLC43A1, Length 953 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-202ENST00000524995 NISCHQ9Y2I1 1504 aa48.85■■■■■ 5.41
SLC43A1-202ENST00000524995 CCDC180Q9P1Z9 1646 aa43.46■■■■■ 4.55
SLC43A1-202ENST00000524995 ABCC9O60706 1549 aa43.32■■■■■ 4.52
SLC43A1-202ENST00000524995 DCAF8L2P0C7V8 631 aa41.35■■■■■ 4.21
SLC43A1-202ENST00000524995 RB1CC1Q8TDY2 1594 aa41.2■■■■■ 4.19
SLC43A1-202ENST00000524995 NACADO15069 1562 aa41.01■■■■■ 4.16
SLC43A1-202ENST00000524995 ZCCHC6Q5VYS8 1495 aaKnown RBP40.55■■■■■ 4.08
SLC43A1-202ENST00000524995 PABPN1Q86U42 306 aaKnown RBP eCLIP40.53■■■■■ 4.08
SLC43A1-202ENST00000524995 MYO15BQ96JP2 1530 aa40.47■■■■■ 4.07
SLC43A1-202ENST00000524995 UNC13AQ9UPW8 1703 aa40.41■■■■■ 4.06
SLC43A1-202ENST00000524995 DNAJC5BQ9UF47 199 aa40.34■■■■■ 4.05
SLC43A1-202ENST00000524995 DCAF1Q9Y4B6 1507 aa40.2■■■■■ 4.03
SLC43A1-202ENST00000524995 BICRAQ9NZM4 1560 aa40.11■■■■■ 4.01
SLC43A1-202ENST00000524995 SCRIBQ14160 1630 aa39.9■■■■□ 3.98
SLC43A1-202ENST00000524995 SHROOM4Q9ULL8 1493 aa39.27■■■■□ 3.88
SLC43A1-202ENST00000524995 CC2D2AQ9P2K1 1620 aa39.05■■■■□ 3.84
SLC43A1-202ENST00000524995 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
SLC43A1-202ENST00000524995 CECR2Q9BXF3 1484 aa38.86■■■■□ 3.81
SLC43A1-202ENST00000524995 SMARCA4P51532 1647 aa38■■■■□ 3.67
SLC43A1-202ENST00000524995 ATAD2BQ9ULI0 1458 aa37.94■■■■□ 3.66
SLC43A1-202ENST00000524995 NCAPD3P42695 1498 aa37.91■■■■□ 3.66
SLC43A1-202ENST00000524995 BAZ1AQ9NRL2 1556 aaPredicted RBP37.81■■■■□ 3.64
SLC43A1-202ENST00000524995 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.63
SLC43A1-202ENST00000524995 SMARCA2P51531 1590 aa37.74■■■■□ 3.63
SLC43A1-202ENST00000524995 HMGXB3Q12766 1538 aa37.6■■■■□ 3.61
SLC43A1-202ENST00000524995 BAZ1BQ9UIG0 1483 aaKnown RBP37.58■■■■□ 3.61
SLC43A1-202ENST00000524995 PEG3Q9GZU2 1588 aa37.5■■■■□ 3.59
SLC43A1-202ENST00000524995 NESP48681 1621 aa37.39■■■■□ 3.58
SLC43A1-202ENST00000524995 WIZO95785 1651 aa37.35■■■■□ 3.57
SLC43A1-202ENST00000524995 ERCC6Q03468 1493 aa37.26■■■■□ 3.55
SLC43A1-202ENST00000524995 RSF1Q96T23 1441 aaPredicted RBP37.12■■■■□ 3.53
SLC43A1-202ENST00000524995 LAMC3Q9Y6N6 1575 aa36.93■■■■□ 3.5
SLC43A1-202ENST00000524995 CUX2O14529 1486 aa36.88■■■■□ 3.49
SLC43A1-202ENST00000524995 CADPSQ9ULU8 1353 aa36.84■■■■□ 3.49
SLC43A1-202ENST00000524995 KIF21AQ7Z4S6 1674 aa36.81■■■■□ 3.48
SLC43A1-202ENST00000524995 TOP2AP11388 1531 aaKnown RBP36.76■■■■□ 3.48
SLC43A1-202ENST00000524995 PDS5BQ9NTI5 1447 aa36.74■■■■□ 3.47
SLC43A1-202ENST00000524995 THOC2Q8NI27 1593 aaKnown RBP36.72■■■■□ 3.47
SLC43A1-202ENST00000524995 DNAJC5Q9H3Z4 198 aa36.49■■■■□ 3.43
SLC43A1-202ENST00000524995 CFTRP13569 1480 aa36.49■■■■□ 3.43
SLC43A1-202ENST00000524995 CCDC88BA6NC98 1476 aa36.46■■■■□ 3.43
SLC43A1-202ENST00000524995 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
SLC43A1-202ENST00000524995 MRC2Q9UBG0 1479 aa36.43■■■■□ 3.42
SLC43A1-202ENST00000524995 CEP164Q9UPV0 1460 aa36.38■■■■□ 3.41
SLC43A1-202ENST00000524995 WDR62O43379 1518 aa36.29■■■■□ 3.4
SLC43A1-202ENST00000524995 URB2Q14146 1524 aaKnown RBP36.16■■■■□ 3.38
SLC43A1-202ENST00000524995 PRDM2Q13029 1718 aa36.08■■■■□ 3.37
SLC43A1-202ENST00000524995 SUPT5HO00267 1087 aaKnown RBP36.08■■■■□ 3.37
SLC43A1-202ENST00000524995 TOPBP1Q92547 1522 aa35.81■■■■□ 3.32
SLC43A1-202ENST00000524995 ZNF608Q9ULD9 1512 aaPredicted RBP35.69■■■■□ 3.3
SLC43A1-202ENST00000524995 DNMBPQ6XZF7 1577 aa35.65■■■■□ 3.3
SLC43A1-202ENST00000524995 IFT140Q96RY7 1462 aa35.61■■■■□ 3.29
SLC43A1-202ENST00000524995 ABCC8Q09428 1581 aa35.59■■■■□ 3.29
SLC43A1-202ENST00000524995 POLA1P09884 1462 aaPredicted RBP35.48■■■■□ 3.27
SLC43A1-202ENST00000524995 RAD54L2Q9Y4B4 1467 aa35.48■■■■□ 3.27
SLC43A1-202ENST00000524995 AQRO60306 1485 aaKnown RBP eCLIP35.44■■■■□ 3.261e-8■■■■■ 28.3
SLC43A1-202ENST00000524995 OSCARQ8IYS5 282 aa35.44■■■■□ 3.26
SLC43A1-202ENST00000524995 TARBP1Q13395 1621 aaKnown RBP35.43■■■■□ 3.26
SLC43A1-202ENST00000524995 CUX1P39880 1505 aa35.42■■■■□ 3.26
SLC43A1-202ENST00000524995 EIF4G3O43432 1585 aaKnown RBP35.39■■■■□ 3.26
SLC43A1-202ENST00000524995 SOGA1O94964 1423 aa35.36■■■■□ 3.25
SLC43A1-202ENST00000524995 FGD5Q6ZNL6 1462 aa35.35■■■■□ 3.25
SLC43A1-202ENST00000524995 TDRD9Q8NDG6 1382 aaKnown RBP35.32■■■■□ 3.24
SLC43A1-202ENST00000524995 TRIM41Q8WV44 630 aa35.28■■■■□ 3.24
SLC43A1-202ENST00000524995 FBLN2P98095 1184 aa35.18■■■■□ 3.22
SLC43A1-202ENST00000524995 CHD1O14646 1710 aa35.09■■■■□ 3.21
SLC43A1-202ENST00000524995 SNAPC4Q5SXM2 1469 aa35.02■■■■□ 3.2
SLC43A1-202ENST00000524995 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
SLC43A1-202ENST00000524995 SYNJ1O43426 1573 aa34.97■■■■□ 3.19
SLC43A1-202ENST00000524995 WRNQ14191 1432 aaPredicted RBP eCLIP34.97■■■■□ 3.19
SLC43A1-202ENST00000524995 RIMBP3CA6NJZ7 1639 aa34.92■■■■□ 3.18
SLC43A1-202ENST00000524995 RIMBP3BA6NNM3 1639 aa34.92■■■■□ 3.18
SLC43A1-202ENST00000524995 RIMBP3Q9UFD9 1639 aa34.92■■■■□ 3.18
SLC43A1-202ENST00000524995 GRIN2BQ13224 1484 aa34.91■■■■□ 3.18
SLC43A1-202ENST00000524995 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
SLC43A1-202ENST00000524995 ABCA10Q8WWZ4 1543 aa34.89■■■■□ 3.18
SLC43A1-202ENST00000524995 CHMP7Q8WUX9 453 aaPredicted RBP34.88■■■■□ 3.17
SLC43A1-202ENST00000524995 TOP2BQ02880 1626 aa34.88■■■■□ 3.17
SLC43A1-202ENST00000524995 BIVM-ERCC5R4GMW8 1640 aa34.87■■■■□ 3.17
SLC43A1-202ENST00000524995 PBRM1Q86U86 1689 aa34.83■■■■□ 3.17
SLC43A1-202ENST00000524995 ARHGEF11O15085 1522 aa34.83■■■■□ 3.17
SLC43A1-202ENST00000524995 MAGI1Q96QZ7 1491 aaPredicted RBP34.8■■■■□ 3.16
SLC43A1-202ENST00000524995 ABCA5Q8WWZ7 1642 aa34.8■■■■□ 3.16
SLC43A1-202ENST00000524995 SYNJ2O15056 1496 aa34.72■■■■□ 3.15
SLC43A1-202ENST00000524995 CYB5RLQ6IPT4 315 aa34.71■■■■□ 3.15
SLC43A1-202ENST00000524995 CLASP1Q7Z460 1538 aa34.62■■■■□ 3.13
SLC43A1-202ENST00000524995 ARAP1Q96P48 1450 aa34.56■■■■□ 3.12
SLC43A1-202ENST00000524995 ADAMTS12P58397 1594 aa34.52■■■■□ 3.12
SLC43A1-202ENST00000524995 GRIN2AQ12879 1464 aa34.48■■■■□ 3.11
SLC43A1-202ENST00000524995 FHAD1B1AJZ9 1412 aa34.43■■■■□ 3.1
SLC43A1-202ENST00000524995 ERICH3Q5RHP9 1530 aa34.41■■■■□ 3.1
SLC43A1-202ENST00000524995 CEP170Q5SW79 1584 aa34.4■■■■□ 3.1
SLC43A1-202ENST00000524995 NUP160Q12769 1436 aa34.32■■■■□ 3.08
SLC43A1-202ENST00000524995 ERCC6L2Q5T890 1561 aa34.32■■■■□ 3.08
SLC43A1-202ENST00000524995 IGF1RP08069 1367 aa34.25■■■■□ 3.07
SLC43A1-202ENST00000524995 KIF27Q86VH2 1401 aa34.23■■■■□ 3.07
SLC43A1-202ENST00000524995 TRHP20396 242 aaPredicted RBP34.16■■■■□ 3.06
SLC43A1-202ENST00000524995 SHROOM2Q13796 1616 aa34.09■■■■□ 3.05
SLC43A1-202ENST00000524995 JPH4Q96JJ6 628 aa34.09■■■■□ 3.05
SLC43A1-202ENST00000524995 PRG4Q92954 1404 aaPredicted RBP34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms