RNA–Protein interactions for RNA: ENST00000582126.1

KPNB1-212, Transcript of karyopherin subunit beta 1, humanhuman

TSL 5

Gene KPNB1, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-212ENST00000582126 NISCHQ9Y2I1 1504 aa33.59■■■□□ 2.97
KPNB1-212ENST00000582126 CCDC180Q9P1Z9 1646 aa29.65■■■□□ 2.34
KPNB1-212ENST00000582126 ABCC9O60706 1549 aa28.25■■■□□ 2.11
KPNB1-212ENST00000582126 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
KPNB1-212ENST00000582126 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
KPNB1-212ENST00000582126 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
KPNB1-212ENST00000582126 NACADO15069 1562 aa27.69■■■□□ 2.02
KPNB1-212ENST00000582126 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
KPNB1-212ENST00000582126 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
KPNB1-212ENST00000582126 SCRIBQ14160 1630 aa27.01■■□□□ 1.92
KPNB1-212ENST00000582126 UNC13AQ9UPW8 1703 aa26.91■■□□□ 1.9
KPNB1-212ENST00000582126 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
KPNB1-212ENST00000582126 BICRAQ9NZM4 1560 aa26.7■■□□□ 1.86
KPNB1-212ENST00000582126 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.822e-6■□□□□ 11
KPNB1-212ENST00000582126 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
KPNB1-212ENST00000582126 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
KPNB1-212ENST00000582126 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
KPNB1-212ENST00000582126 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
KPNB1-212ENST00000582126 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
KPNB1-212ENST00000582126 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
KPNB1-212ENST00000582126 PEG3Q9GZU2 1588 aa25.74■■□□□ 1.71
KPNB1-212ENST00000582126 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
KPNB1-212ENST00000582126 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
KPNB1-212ENST00000582126 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
KPNB1-212ENST00000582126 WIZO95785 1651 aa25.61■■□□□ 1.69
KPNB1-212ENST00000582126 NCAPD3P42695 1498 aa25.52■■□□□ 1.68
KPNB1-212ENST00000582126 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
KPNB1-212ENST00000582126 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
KPNB1-212ENST00000582126 TOP2AP11388 1531 aaKnown RBP25.45■■□□□ 1.66
KPNB1-212ENST00000582126 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
KPNB1-212ENST00000582126 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
KPNB1-212ENST00000582126 AEBP2Q6ZN18 517 aaPredicted RBP25.16■■□□□ 1.62
KPNB1-212ENST00000582126 CCDC88BA6NC98 1476 aa25.08■■□□□ 1.6
KPNB1-212ENST00000582126 CFTRP13569 1480 aa24.8■■□□□ 1.56
KPNB1-212ENST00000582126 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
KPNB1-212ENST00000582126 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
KPNB1-212ENST00000582126 PRDM2Q13029 1718 aa24.71■■□□□ 1.55
KPNB1-212ENST00000582126 NESP48681 1621 aa24.64■■□□□ 1.54
KPNB1-212ENST00000582126 PDS5BQ9NTI5 1447 aa24.52■■□□□ 1.52
KPNB1-212ENST00000582126 FANCD2Q9BXW9 1451 aa24.5■■□□□ 1.51
KPNB1-212ENST00000582126 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
KPNB1-212ENST00000582126 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
KPNB1-212ENST00000582126 ABCC8Q09428 1581 aa24.34■■□□□ 1.49
KPNB1-212ENST00000582126 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
KPNB1-212ENST00000582126 ERCC6Q03468 1493 aa24.32■■□□□ 1.48
KPNB1-212ENST00000582126 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
KPNB1-212ENST00000582126 CUX1P39880 1505 aa24.25■■□□□ 1.47
KPNB1-212ENST00000582126 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
KPNB1-212ENST00000582126 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
KPNB1-212ENST00000582126 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
KPNB1-212ENST00000582126 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
KPNB1-212ENST00000582126 TOP2BQ02880 1626 aa24.24■■□□□ 1.47
KPNB1-212ENST00000582126 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
KPNB1-212ENST00000582126 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
KPNB1-212ENST00000582126 WDR62O43379 1518 aa24.2■■□□□ 1.46
KPNB1-212ENST00000582126 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
KPNB1-212ENST00000582126 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
KPNB1-212ENST00000582126 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
KPNB1-212ENST00000582126 POLA1P09884 1462 aaPredicted RBP24.04■■□□□ 1.44
KPNB1-212ENST00000582126 CUX2O14529 1486 aa23.94■■□□□ 1.42
KPNB1-212ENST00000582126 WDR97A6NE52 1622 aa23.9■■□□□ 1.42
KPNB1-212ENST00000582126 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
KPNB1-212ENST00000582126 ABCA10Q8WWZ4 1543 aa23.89■■□□□ 1.42
KPNB1-212ENST00000582126 IFT140Q96RY7 1462 aa23.89■■□□□ 1.42
KPNB1-212ENST00000582126 SOGA1O94964 1423 aa23.89■■□□□ 1.41
KPNB1-212ENST00000582126 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
KPNB1-212ENST00000582126 EEA1Q15075 1411 aa23.77■■□□□ 1.4
KPNB1-212ENST00000582126 ABCA5Q8WWZ7 1642 aa23.76■■□□□ 1.39
KPNB1-212ENST00000582126 KIF27Q86VH2 1401 aa23.76■■□□□ 1.39
KPNB1-212ENST00000582126 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
KPNB1-212ENST00000582126 EIF4G3O43432 1585 aaKnown RBP23.68■■□□□ 1.38
KPNB1-212ENST00000582126 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
KPNB1-212ENST00000582126 GAPVD1Q14C86 1478 aa23.66■■□□□ 1.38
KPNB1-212ENST00000582126 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
KPNB1-212ENST00000582126 ERICH3Q5RHP9 1530 aa23.63■■□□□ 1.37
KPNB1-212ENST00000582126 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
KPNB1-212ENST00000582126 AQRO60306 1485 aaKnown RBP eCLIP23.6■■□□□ 1.37
KPNB1-212ENST00000582126 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
KPNB1-212ENST00000582126 IGF1RP08069 1367 aa23.55■■□□□ 1.36
KPNB1-212ENST00000582126 CUL7Q14999 1698 aa23.54■■□□□ 1.36
KPNB1-212ENST00000582126 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
KPNB1-212ENST00000582126 PRXQ9BXM0 1461 aa23.5■■□□□ 1.35
KPNB1-212ENST00000582126 ADAMTS12P58397 1594 aa23.49■■□□□ 1.35
KPNB1-212ENST00000582126 KIF21BO75037 1637 aa23.49■■□□□ 1.35
KPNB1-212ENST00000582126 FAM9AQ8IZU1 332 aaPredicted RBP23.49■■□□□ 1.35
KPNB1-212ENST00000582126 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
KPNB1-212ENST00000582126 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
KPNB1-212ENST00000582126 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
KPNB1-212ENST00000582126 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
KPNB1-212ENST00000582126 RAPGEF2Q9Y4G8 1499 aa23.38■■□□□ 1.33
KPNB1-212ENST00000582126 SYNJ2O15056 1496 aa23.37■■□□□ 1.33
KPNB1-212ENST00000582126 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
KPNB1-212ENST00000582126 GRIN2AQ12879 1464 aa23.29■■□□□ 1.32
KPNB1-212ENST00000582126 CHD1O14646 1710 aa23.22■■□□□ 1.31
KPNB1-212ENST00000582126 NUP160Q12769 1436 aa23.19■■□□□ 1.3
KPNB1-212ENST00000582126 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
KPNB1-212ENST00000582126 TNIKQ9UKE5 1360 aa23.16■■□□□ 1.3
KPNB1-212ENST00000582126 CTTNBP2Q8WZ74 1663 aa23.16■■□□□ 1.3
KPNB1-212ENST00000582126 CEP170Q5SW79 1584 aa23.15■■□□□ 1.3
KPNB1-212ENST00000582126 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms