RNA–Protein interactions for RNA: ENST00000359671.5

FN1-206, Transcript of fibronectin 1, humanhuman

TSL 5 BASIC

Gene FN1, Length 8,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-206ENST00000359671 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
FN1-206ENST00000359671 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.8
FN1-206ENST00000359671 FAM9AQ8IZU1 332 aaPredicted RBP19.32■□□□□ 0.68
FN1-206ENST00000359671 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
FN1-206ENST00000359671 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
FN1-206ENST00000359671 APLP2Q06481 763 aa18.99■□□□□ 0.63
FN1-206ENST00000359671 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
FN1-206ENST00000359671 CCER1Q8TC90 406 aaPredicted RBP18.32■□□□□ 0.52
FN1-206ENST00000359671 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.52
FN1-206ENST00000359671 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
FN1-206ENST00000359671 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
FN1-206ENST00000359671 TRIM41Q8WV44 630 aa18.05■□□□□ 0.48
FN1-206ENST00000359671 ERICH6Q7L0X2 663 aa17.94■□□□□ 0.46
FN1-206ENST00000359671 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
FN1-206ENST00000359671 ATP1B4Q9UN42 357 aaPredicted RBP17.9■□□□□ 0.46
FN1-206ENST00000359671 NEFLP07196 543 aa17.83■□□□□ 0.44
FN1-206ENST00000359671 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
FN1-206ENST00000359671 MYT1Q01538 1121 aa17.64■□□□□ 0.42
FN1-206ENST00000359671 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
FN1-206ENST00000359671 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
FN1-206ENST00000359671 MYT1LQ9UL68 1186 aa17.5■□□□□ 0.39
FN1-206ENST00000359671 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
FN1-206ENST00000359671 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
FN1-206ENST00000359671 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
FN1-206ENST00000359671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.41■□□□□ 0.38
FN1-206ENST00000359671 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
FN1-206ENST00000359671 TRIM26Q12899 539 aaPredicted RBP17.38■□□□□ 0.37
FN1-206ENST00000359671 ABCC9O60706 1549 aa17.1■□□□□ 0.33
FN1-206ENST00000359671 POLR3GLQ9BT43 218 aa17.02■□□□□ 0.31
FN1-206ENST00000359671 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.31
FN1-206ENST00000359671 ITGAEP38570 1179 aa17.01■□□□□ 0.31
FN1-206ENST00000359671 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
FN1-206ENST00000359671 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
FN1-206ENST00000359671 CLSPNQ9HAW4 1339 aa16.89■□□□□ 0.29
FN1-206ENST00000359671 NEFMP07197 916 aa16.89■□□□□ 0.29
FN1-206ENST00000359671 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
FN1-206ENST00000359671 CDK11AQ9UQ88 783 aaPredicted RBP16.84■□□□□ 0.29
FN1-206ENST00000359671 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
FN1-206ENST00000359671 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
FN1-206ENST00000359671 RTL5Q5HYW3 569 aaPredicted RBP16.81■□□□□ 0.28
FN1-206ENST00000359671 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
FN1-206ENST00000359671 HRCP23327 699 aa16.8■□□□□ 0.28
FN1-206ENST00000359671 TRIM52Q96A61 297 aa16.79■□□□□ 0.28
FN1-206ENST00000359671 PPARGC1BQ86YN6 1023 aaKnown RBP16.76■□□□□ 0.27
FN1-206ENST00000359671 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
FN1-206ENST00000359671 ESF1Q9H501 851 aaKnown RBP16.7■□□□□ 0.26
FN1-206ENST00000359671 ANP32CO43423 234 aa16.69■□□□□ 0.26
FN1-206ENST00000359671 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
FN1-206ENST00000359671 FBLN2P98095 1184 aa16.65■□□□□ 0.26
FN1-206ENST00000359671 DIEXFQ68CQ4 756 aaKnown RBP16.64■□□□□ 0.26
FN1-206ENST00000359671 NACADO15069 1562 aa16.62■□□□□ 0.25
FN1-206ENST00000359671 BCANQ96GW7 911 aa16.59■□□□□ 0.25
FN1-206ENST00000359671 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
FN1-206ENST00000359671 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
FN1-206ENST00000359671 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
FN1-206ENST00000359671 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
FN1-206ENST00000359671 NEUROD1Q13562 356 aa16.48■□□□□ 0.23
FN1-206ENST00000359671 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
FN1-206ENST00000359671 SLC24A1O60721 1099 aa16.46■□□□□ 0.22
FN1-206ENST00000359671 ZNF326Q5BKZ1 582 aaKnown RBP16.43■□□□□ 0.22
FN1-206ENST00000359671 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
FN1-206ENST00000359671 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
FN1-206ENST00000359671 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
FN1-206ENST00000359671 ANP32BQ92688 251 aaKnown RBP16.36■□□□□ 0.21
FN1-206ENST00000359671 UPF2Q9HAU5 1272 aaKnown RBP16.35■□□□□ 0.21
FN1-206ENST00000359671 EEA1Q15075 1411 aa16.33■□□□□ 0.2
FN1-206ENST00000359671 ANP32AP39687 249 aaKnown RBP16.32■□□□□ 0.2
FN1-206ENST00000359671 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
FN1-206ENST00000359671 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.19
FN1-206ENST00000359671 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
FN1-206ENST00000359671 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.25■□□□□ 0.19
FN1-206ENST00000359671 EIF5BO60841 1220 aaKnown RBP16.24■□□□□ 0.19
FN1-206ENST00000359671 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
FN1-206ENST00000359671 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
FN1-206ENST00000359671 HSP90AA1P07900 732 aaKnown RBP16.22■□□□□ 0.19
FN1-206ENST00000359671 MTUS2Q5JR59 1369 aa16.2■□□□□ 0.18
FN1-206ENST00000359671 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
FN1-206ENST00000359671 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
FN1-206ENST00000359671 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
FN1-206ENST00000359671 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
FN1-206ENST00000359671 NPM2Q86SE8 214 aaKnown RBP16.13■□□□□ 0.17
FN1-206ENST00000359671 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
FN1-206ENST00000359671 CHGAP10645 457 aaKnown RBP16.1■□□□□ 0.17
FN1-206ENST00000359671 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
FN1-206ENST00000359671 GOLGA3Q08378 1498 aa16.09■□□□□ 0.17
FN1-206ENST00000359671 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
FN1-206ENST00000359671 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.17
FN1-206ENST00000359671 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
FN1-206ENST00000359671 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
FN1-206ENST00000359671 CLIP1P30622 1438 aa16.02■□□□□ 0.16
FN1-206ENST00000359671 SMARCA2P51531 1590 aa16.02■□□□□ 0.15
FN1-206ENST00000359671 CDK11BP21127 795 aaKnown RBP16.01■□□□□ 0.15
FN1-206ENST00000359671 FHAD1B1AJZ9 1412 aa15.99■□□□□ 0.15
FN1-206ENST00000359671 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
FN1-206ENST00000359671 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
FN1-206ENST00000359671 ANP32EQ9BTT0 268 aa15.97■□□□□ 0.15
FN1-206ENST00000359671 PLEKHD1A6NEE1 506 aa15.97■□□□□ 0.15
FN1-206ENST00000359671 PPP1R15AO75807 674 aaPredicted RBP15.96■□□□□ 0.14
FN1-206ENST00000359671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.14
FN1-206ENST00000359671 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms