RNA–Protein interactions for RNA: ENST00000354785.8

FN1-203, Transcript of fibronectin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FN1, Length 8,905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-203ENST00000354785 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
FN1-203ENST00000354785 NISCHQ9Y2I1 1504 aa18.72■□□□□ 0.59
FN1-203ENST00000354785 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
FN1-203ENST00000354785 SHROOM4Q9ULL8 1493 aa17.98■□□□□ 0.47
FN1-203ENST00000354785 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
FN1-203ENST00000354785 APLP2Q06481 763 aa17.19■□□□□ 0.34
FN1-203ENST00000354785 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
FN1-203ENST00000354785 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
FN1-203ENST00000354785 TTBK1Q5TCY1 1321 aaPredicted RBP16.99■□□□□ 0.31
FN1-203ENST00000354785 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
FN1-203ENST00000354785 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
FN1-203ENST00000354785 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
FN1-203ENST00000354785 ATP1B4Q9UN42 357 aaPredicted RBP16.66■□□□□ 0.26
FN1-203ENST00000354785 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.25
FN1-203ENST00000354785 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
FN1-203ENST00000354785 ZEB1P37275 1124 aaPredicted RBP16.58■□□□□ 0.24
FN1-203ENST00000354785 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
FN1-203ENST00000354785 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
FN1-203ENST00000354785 ERICH6Q7L0X2 663 aa16.25■□□□□ 0.19
FN1-203ENST00000354785 TRIM26Q12899 539 aaPredicted RBP16.23■□□□□ 0.19
FN1-203ENST00000354785 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
FN1-203ENST00000354785 NEFLP07196 543 aa16.16■□□□□ 0.18
FN1-203ENST00000354785 LOC105371045A0A1W2PR82 267 aa16.13■□□□□ 0.17
FN1-203ENST00000354785 ITGAEP38570 1179 aa16.09■□□□□ 0.17
FN1-203ENST00000354785 ABCC9O60706 1549 aa16.05■□□□□ 0.16
FN1-203ENST00000354785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
FN1-203ENST00000354785 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
FN1-203ENST00000354785 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
FN1-203ENST00000354785 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
FN1-203ENST00000354785 HRCP23327 699 aa15.94■□□□□ 0.14
FN1-203ENST00000354785 POLR3GLQ9BT43 218 aa15.9■□□□□ 0.14
FN1-203ENST00000354785 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
FN1-203ENST00000354785 CCDC180Q9P1Z9 1646 aa15.82■□□□□ 0.12
FN1-203ENST00000354785 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
FN1-203ENST00000354785 CNGB1Q14028 1251 aaPredicted RBP15.77■□□□□ 0.12
FN1-203ENST00000354785 FAM50AQ14320 339 aaKnown RBP15.71■□□□□ 0.11
FN1-203ENST00000354785 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
FN1-203ENST00000354785 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
FN1-203ENST00000354785 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
FN1-203ENST00000354785 MYT1Q01538 1121 aa15.63■□□□□ 0.09
FN1-203ENST00000354785 TRIM52Q96A61 297 aa15.54■□□□□ 0.08
FN1-203ENST00000354785 NEUROD1Q13562 356 aa15.54■□□□□ 0.08
FN1-203ENST00000354785 FBLN2P98095 1184 aa15.47■□□□□ 0.07
FN1-203ENST00000354785 ZCCHC6Q5VYS8 1495 aaKnown RBP15.47■□□□□ 0.07
FN1-203ENST00000354785 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
FN1-203ENST00000354785 ZNF326Q5BKZ1 582 aaKnown RBP15.4■□□□□ 0.06
FN1-203ENST00000354785 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
FN1-203ENST00000354785 ANP32CO43423 234 aa15.34■□□□□ 0.05
FN1-203ENST00000354785 P3H3Q8IVL6 736 aa15.34■□□□□ 0.05
FN1-203ENST00000354785 ARID3CA6NKF2 412 aa15.3■□□□□ 0.04
FN1-203ENST00000354785 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
FN1-203ENST00000354785 RTL5Q5HYW3 569 aaPredicted RBP15.26■□□□□ 0.03
FN1-203ENST00000354785 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
FN1-203ENST00000354785 GTF3C3Q9Y5Q9 886 aa15.23■□□□□ 0.03
FN1-203ENST00000354785 BCANQ96GW7 911 aa15.22■□□□□ 0.03
FN1-203ENST00000354785 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
FN1-203ENST00000354785 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
FN1-203ENST00000354785 CDK11AQ9UQ88 783 aaPredicted RBP15.14■□□□□ 0.01
FN1-203ENST00000354785 SLC24A1O60721 1099 aa15.12■□□□□ 0.01
FN1-203ENST00000354785 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
FN1-203ENST00000354785 CANXP27824 592 aaKnown RBP15.1■□□□□ 0.01
FN1-203ENST00000354785 NACADO15069 1562 aa15.08■□□□□ 0
FN1-203ENST00000354785 TONSLQ96HA7 1378 aa15.06■□□□□ 0
FN1-203ENST00000354785 BCL11AQ9H165 835 aa15.06■□□□□ 0
FN1-203ENST00000354785 NEFMP07197 916 aa15.05■□□□□ 0
FN1-203ENST00000354785 ACIN1Q9UKV3 1341 aaKnown RBP14.97□□□□□ -0.01
FN1-203ENST00000354785 ESF1Q9H501 851 aaKnown RBP14.95□□□□□ -0.02
FN1-203ENST00000354785 MYO15BQ96JP2 1530 aa14.93□□□□□ -0.02
FN1-203ENST00000354785 CLIP1P30622 1438 aa14.92□□□□□ -0.02
FN1-203ENST00000354785 MTUS2Q5JR59 1369 aa14.91□□□□□ -0.02
FN1-203ENST00000354785 CHIC2Q9UKJ5 165 aa14.91□□□□□ -0.02
FN1-203ENST00000354785 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
FN1-203ENST00000354785 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
FN1-203ENST00000354785 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
FN1-203ENST00000354785 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
FN1-203ENST00000354785 ANP32AP39687 249 aaKnown RBP14.89□□□□□ -0.03
FN1-203ENST00000354785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
FN1-203ENST00000354785 HNRNPUQ00839 825 aaKnown RBP eCLIP14.87□□□□□ -0.03
FN1-203ENST00000354785 NPM1P06748 294 aaKnown RBP eCLIP14.87□□□□□ -0.03
FN1-203ENST00000354785 GOLGA3Q08378 1498 aa14.85□□□□□ -0.03
FN1-203ENST00000354785 RSF1Q96T23 1441 aaPredicted RBP14.85□□□□□ -0.03
FN1-203ENST00000354785 FAM9BQ8IZU0 186 aa14.85□□□□□ -0.03
FN1-203ENST00000354785 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
FN1-203ENST00000354785 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
FN1-203ENST00000354785 FKBP8Q14318 412 aa14.83□□□□□ -0.03
FN1-203ENST00000354785 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.03
FN1-203ENST00000354785 NPM2Q86SE8 214 aaKnown RBP14.81□□□□□ -0.04
FN1-203ENST00000354785 CEP162Q5TB80 1403 aa14.81□□□□□ -0.04
FN1-203ENST00000354785 TMC1Q8TDI8 760 aa14.8□□□□□ -0.04
FN1-203ENST00000354785 SALL2Q9Y467 1007 aaPredicted RBP14.8□□□□□ -0.04
FN1-203ENST00000354785 EEA1Q15075 1411 aa14.79□□□□□ -0.04
FN1-203ENST00000354785 TSPY4P0CV99 314 aa14.79□□□□□ -0.04
FN1-203ENST00000354785 TSPY10P0CW01 314 aa14.79□□□□□ -0.04
FN1-203ENST00000354785 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
FN1-203ENST00000354785 WRNQ14191 1432 aaPredicted RBP eCLIP14.77□□□□□ -0.05
FN1-203ENST00000354785 HSP90AA1P07900 732 aaKnown RBP14.74□□□□□ -0.05
FN1-203ENST00000354785 KIF27Q86VH2 1401 aa14.72□□□□□ -0.05
FN1-203ENST00000354785 HIRIP3Q9BW71 556 aaPredicted RBP14.72□□□□□ -0.05
FN1-203ENST00000354785 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
FN1-203ENST00000354785 RRP7BPQ9NSQ0 103 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms