RNA–Protein interactions for RNA: ENST00000530159.5

SLC43A1-206, Transcript of solute carrier family 43 member 1, humanhuman

TSL 5

Gene SLC43A1, Length 788 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-206ENST00000530159 NISCHQ9Y2I1 1504 aa39.17■■■■□ 3.86
SLC43A1-206ENST00000530159 CCDC180Q9P1Z9 1646 aa34.75■■■■□ 3.15
SLC43A1-206ENST00000530159 ABCC9O60706 1549 aa33.75■■■□□ 2.99
SLC43A1-206ENST00000530159 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
SLC43A1-206ENST00000530159 NACADO15069 1562 aa32.61■■■□□ 2.81
SLC43A1-206ENST00000530159 DCAF8L2P0C7V8 631 aa32.59■■■□□ 2.81
SLC43A1-206ENST00000530159 RB1CC1Q8TDY2 1594 aa32.58■■■□□ 2.81
SLC43A1-206ENST00000530159 MYO15BQ96JP2 1530 aa32.5■■■□□ 2.79
SLC43A1-206ENST00000530159 DCAF1Q9Y4B6 1507 aa32.44■■■□□ 2.78
SLC43A1-206ENST00000530159 UNC13AQ9UPW8 1703 aa31.82■■■□□ 2.68
SLC43A1-206ENST00000530159 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
SLC43A1-206ENST00000530159 BICRAQ9NZM4 1560 aa31.57■■■□□ 2.64
SLC43A1-206ENST00000530159 PABPN1Q86U42 306 aaKnown RBP eCLIP31.55■■■□□ 2.64
SLC43A1-206ENST00000530159 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
SLC43A1-206ENST00000530159 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
SLC43A1-206ENST00000530159 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
SLC43A1-206ENST00000530159 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
SLC43A1-206ENST00000530159 CECR2Q9BXF3 1484 aa30.48■■■□□ 2.47
SLC43A1-206ENST00000530159 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
SLC43A1-206ENST00000530159 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
SLC43A1-206ENST00000530159 MROH2BQ7Z745 1585 aa30.19■■■□□ 2.42
SLC43A1-206ENST00000530159 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
SLC43A1-206ENST00000530159 SMARCA2P51531 1590 aa30.12■■■□□ 2.41
SLC43A1-206ENST00000530159 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
SLC43A1-206ENST00000530159 PEG3Q9GZU2 1588 aa30.06■■■□□ 2.4
SLC43A1-206ENST00000530159 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
SLC43A1-206ENST00000530159 RSF1Q96T23 1441 aaPredicted RBP29.92■■■□□ 2.38
SLC43A1-206ENST00000530159 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
SLC43A1-206ENST00000530159 WIZO95785 1651 aa29.87■■■□□ 2.37
SLC43A1-206ENST00000530159 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
SLC43A1-206ENST00000530159 SUPT5HO00267 1087 aaKnown RBP29.32■■■□□ 2.28
SLC43A1-206ENST00000530159 NESP48681 1621 aa29.27■■■□□ 2.28
SLC43A1-206ENST00000530159 LAMC3Q9Y6N6 1575 aa29.26■■■□□ 2.27
SLC43A1-206ENST00000530159 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
SLC43A1-206ENST00000530159 CADPSQ9ULU8 1353 aa29.2■■■□□ 2.26
SLC43A1-206ENST00000530159 ERCC6Q03468 1493 aa29.1■■■□□ 2.25
SLC43A1-206ENST00000530159 CFTRP13569 1480 aa29.09■■■□□ 2.25
SLC43A1-206ENST00000530159 PDS5BQ9NTI5 1447 aa29.04■■■□□ 2.24
SLC43A1-206ENST00000530159 KIF21AQ7Z4S6 1674 aa28.94■■■□□ 2.22
SLC43A1-206ENST00000530159 PRDM2Q13029 1718 aa28.9■■■□□ 2.22
SLC43A1-206ENST00000530159 FANCD2Q9BXW9 1451 aa28.88■■■□□ 2.21
SLC43A1-206ENST00000530159 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
SLC43A1-206ENST00000530159 THOC2Q8NI27 1593 aaKnown RBP28.8■■■□□ 2.2
SLC43A1-206ENST00000530159 MRC2Q9UBG0 1479 aa28.74■■■□□ 2.19
SLC43A1-206ENST00000530159 DNAJC5Q9H3Z4 198 aa28.73■■■□□ 2.19
SLC43A1-206ENST00000530159 CUX2O14529 1486 aa28.71■■■□□ 2.19
SLC43A1-206ENST00000530159 WDR62O43379 1518 aa28.64■■■□□ 2.18
SLC43A1-206ENST00000530159 URB2Q14146 1524 aaKnown RBP28.58■■■□□ 2.17
SLC43A1-206ENST00000530159 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
SLC43A1-206ENST00000530159 TOPBP1Q92547 1522 aa28.45■■■□□ 2.15
SLC43A1-206ENST00000530159 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.14
SLC43A1-206ENST00000530159 CUX1P39880 1505 aa28.32■■■□□ 2.12
SLC43A1-206ENST00000530159 WRNQ14191 1432 aaPredicted RBP eCLIP28.23■■■□□ 2.11
SLC43A1-206ENST00000530159 POLA1P09884 1462 aaPredicted RBP28.22■■■□□ 2.11
SLC43A1-206ENST00000530159 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
SLC43A1-206ENST00000530159 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
SLC43A1-206ENST00000530159 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.1
SLC43A1-206ENST00000530159 SYNJ1O43426 1573 aa28.14■■■□□ 2.1
SLC43A1-206ENST00000530159 TOP2BQ02880 1626 aa28.14■■■□□ 2.09
SLC43A1-206ENST00000530159 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
SLC43A1-206ENST00000530159 SOGA1O94964 1423 aa28.09■■■□□ 2.09
SLC43A1-206ENST00000530159 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
SLC43A1-206ENST00000530159 ZNF608Q9ULD9 1512 aaPredicted RBP28.05■■■□□ 2.08
SLC43A1-206ENST00000530159 EIF4G3O43432 1585 aaKnown RBP27.98■■■□□ 2.07
SLC43A1-206ENST00000530159 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
SLC43A1-206ENST00000530159 ABCA10Q8WWZ4 1543 aa27.93■■■□□ 2.06
SLC43A1-206ENST00000530159 AQRO60306 1485 aaKnown RBP eCLIP27.91■■■□□ 2.062e-7■■■■□ 23.7
SLC43A1-206ENST00000530159 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
SLC43A1-206ENST00000530159 ABCA5Q8WWZ7 1642 aa27.81■■■□□ 2.04
SLC43A1-206ENST00000530159 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
SLC43A1-206ENST00000530159 GRIN2BQ13224 1484 aa27.76■■■□□ 2.04
SLC43A1-206ENST00000530159 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
SLC43A1-206ENST00000530159 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.02
SLC43A1-206ENST00000530159 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
SLC43A1-206ENST00000530159 MAGI1Q96QZ7 1491 aaPredicted RBP27.67■■■□□ 2.02
SLC43A1-206ENST00000530159 KIF27Q86VH2 1401 aa27.62■■■□□ 2.01
SLC43A1-206ENST00000530159 ERICH3Q5RHP9 1530 aa27.61■■■□□ 2.01
SLC43A1-206ENST00000530159 CHD1O14646 1710 aa27.56■■■□□ 2
SLC43A1-206ENST00000530159 SYNJ2O15056 1496 aa27.55■■■□□ 2
SLC43A1-206ENST00000530159 ADAMTS12P58397 1594 aa27.53■■■□□ 2
SLC43A1-206ENST00000530159 FBLN2P98095 1184 aa27.53■■■□□ 2
SLC43A1-206ENST00000530159 OSCARQ8IYS5 282 aa27.51■■□□□ 1.99
SLC43A1-206ENST00000530159 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
SLC43A1-206ENST00000530159 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
SLC43A1-206ENST00000530159 FHAD1B1AJZ9 1412 aa27.49■■□□□ 1.99
SLC43A1-206ENST00000530159 IGF1RP08069 1367 aa27.45■■□□□ 1.98
SLC43A1-206ENST00000530159 CUL7Q14999 1698 aa27.41■■□□□ 1.98
SLC43A1-206ENST00000530159 GRIN2AQ12879 1464 aa27.4■■□□□ 1.98
SLC43A1-206ENST00000530159 RUSC2Q8N2Y8 1516 aa27.4■■□□□ 1.98
SLC43A1-206ENST00000530159 CARMIL1Q5VZK9 1371 aa27.31■■□□□ 1.96
SLC43A1-206ENST00000530159 CLASP1Q7Z460 1538 aa27.28■■□□□ 1.96
SLC43A1-206ENST00000530159 NUP160Q12769 1436 aa27.27■■□□□ 1.96
SLC43A1-206ENST00000530159 EEA1Q15075 1411 aa27.26■■□□□ 1.95
SLC43A1-206ENST00000530159 CEP170Q5SW79 1584 aa27.25■■□□□ 1.95
SLC43A1-206ENST00000530159 RAPGEF2Q9Y4G8 1499 aa27.19■■□□□ 1.94
SLC43A1-206ENST00000530159 PRXQ9BXM0 1461 aa27.14■■□□□ 1.94
SLC43A1-206ENST00000530159 CSRNP3Q8WYN3 585 aa27.14■■□□□ 1.94
SLC43A1-206ENST00000530159 ARHGEF11O15085 1522 aa27.11■■□□□ 1.93
SLC43A1-206ENST00000530159 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
SLC43A1-206ENST00000530159 RIMBP3CA6NJZ7 1639 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms