Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.23■□□□□ 0.67
APLFQ8IW19 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.23■□□□□ 0.67
APLFQ8IW19 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
APLFQ8IW19 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.23■□□□□ 0.67
APLFQ8IW19 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.23■□□□□ 0.67
APLFQ8IW19 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.23■□□□□ 0.67
APLFQ8IW19 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.23■□□□□ 0.67
APLFQ8IW19 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
APLFQ8IW19 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.23■□□□□ 0.67
APLFQ8IW19 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.23■□□□□ 0.67
APLFQ8IW19 PCDHB18P-201ENST00000524813 2368 ntBASIC19.23■□□□□ 0.67
APLFQ8IW19 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
APLFQ8IW19 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
APLFQ8IW19 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.23■□□□□ 0.67
APLFQ8IW19 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 MIR718-201ENST00000390190 70 ntBASIC19.22■□□□□ 0.67
APLFQ8IW19 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
APLFQ8IW19 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.22■□□□□ 0.67
APLFQ8IW19 PNMA6B-201ENST00000538162 1200 ntBASIC19.22■□□□□ 0.67
APLFQ8IW19 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.22■□□□□ 0.67
APLFQ8IW19 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.22■□□□□ 0.67
APLFQ8IW19 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.22■□□□□ 0.67
APLFQ8IW19 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.22■□□□□ 0.67
APLFQ8IW19 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
APLFQ8IW19 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.22■□□□□ 0.67
APLFQ8IW19 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
APLFQ8IW19 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
APLFQ8IW19 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.21■□□□□ 0.67
APLFQ8IW19 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
APLFQ8IW19 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
APLFQ8IW19 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.21■□□□□ 0.67
APLFQ8IW19 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
APLFQ8IW19 KRT18P68-201ENST00000392293 1000 ntBASIC19.21■□□□□ 0.67
APLFQ8IW19 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.21■□□□□ 0.67
APLFQ8IW19 KRT17P3-201ENST00000420566 1262 ntBASIC19.21■□□□□ 0.67
APLFQ8IW19 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
APLFQ8IW19 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.21■□□□□ 0.67
APLFQ8IW19 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.21■□□□□ 0.67
APLFQ8IW19 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
APLFQ8IW19 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.21■□□□□ 0.67
APLFQ8IW19 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
APLFQ8IW19 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
APLFQ8IW19 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.21■□□□□ 0.67
APLFQ8IW19 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.21■□□□□ 0.67
APLFQ8IW19 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
APLFQ8IW19 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.21■□□□□ 0.67
APLFQ8IW19 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
APLFQ8IW19 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APLFQ8IW19 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 AC125437.2-201ENST00000625180 2167 ntBASIC19.2■□□□□ 0.66
APLFQ8IW19 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
APLFQ8IW19 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
APLFQ8IW19 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.2■□□□□ 0.66
APLFQ8IW19 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
APLFQ8IW19 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.2■□□□□ 0.66
APLFQ8IW19 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.2■□□□□ 0.66
APLFQ8IW19 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
APLFQ8IW19 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms