Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHGA12O60330 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA12O60330 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA12O60330 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHGA12O60330 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHGA12O60330 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA12O60330 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA12O60330 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA12O60330 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 ATP5G1P1-201ENST00000448724 379 ntBASIC19.29■□□□□ 0.68
PCDHGA12O60330 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.29■□□□□ 0.68
PCDHGA12O60330 AC073314.1-201ENST00000568729 2216 ntBASIC19.29■□□□□ 0.68
PCDHGA12O60330 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA12O60330 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHGA12O60330 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 AC128688.1-201ENST00000487626 519 ntBASIC19.28■□□□□ 0.68
PCDHGA12O60330 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 AC087388.1-201ENST00000571370 1112 ntBASIC19.28■□□□□ 0.68
PCDHGA12O60330 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA12O60330 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGA12O60330 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA12O60330 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 AL391422.3-201ENST00000603791 2761 ntBASIC19.27■□□□□ 0.68
PCDHGA12O60330 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA12O60330 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA12O60330 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA12O60330 YBX1P10-201ENST00000444752 975 ntBASIC19.27■□□□□ 0.68
PCDHGA12O60330 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA12O60330 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA12O60330 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA12O60330 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGA12O60330 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA12O60330 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA12O60330 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDHGA12O60330 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGA12O60330 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.27■□□□□ 0.67
PCDHGA12O60330 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.27■□□□□ 0.67
PCDHGA12O60330 AC116351.2-201ENST00000606540 1585 ntBASIC19.27■□□□□ 0.67
PCDHGA12O60330 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 AC011506.1-201ENST00000474329 610 ntBASIC19.26■□□□□ 0.67
PCDHGA12O60330 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 AC006011.2-201ENST00000621313 1158 ntBASIC19.26■□□□□ 0.67
PCDHGA12O60330 AC131212.4-201ENST00000623606 975 ntBASIC19.26■□□□□ 0.67
PCDHGA12O60330 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGA12O60330 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms