RNA–Protein interactions for RNA: ENST00000506597.1

SCOC-207, Transcript of short coiled-coil protein, humanhuman

TSL 1 (best) BASIC

Gene SCOC, Length 1,838 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCOC-207ENST00000506597 NISCHQ9Y2I1 1504 aa45.92■■■■■ 4.94
SCOC-207ENST00000506597 CCDC180Q9P1Z9 1646 aa39.92■■■■□ 3.98
SCOC-207ENST00000506597 ZCCHC6Q5VYS8 1495 aaKnown RBP38.63■■■■□ 3.77
SCOC-207ENST00000506597 DCAF8L2P0C7V8 631 aa37.93■■■■□ 3.66
SCOC-207ENST00000506597 DCAF1Q9Y4B6 1507 aa37.93■■■■□ 3.66
SCOC-207ENST00000506597 SHROOM4Q9ULL8 1493 aa37.77■■■■□ 3.64
SCOC-207ENST00000506597 ABCC9O60706 1549 aa37.46■■■■□ 3.59
SCOC-207ENST00000506597 MYO15BQ96JP2 1530 aa37.34■■■■□ 3.57
SCOC-207ENST00000506597 NACADO15069 1562 aa37.07■■■■□ 3.53
SCOC-207ENST00000506597 SCRIBQ14160 1630 aa36.8■■■■□ 3.48
SCOC-207ENST00000506597 RB1CC1Q8TDY2 1594 aa36.71■■■■□ 3.47
SCOC-207ENST00000506597 SUPT5HO00267 1087 aaKnown RBP36.52■■■■□ 3.44
SCOC-207ENST00000506597 UNC13AQ9UPW8 1703 aa36.08■■■■□ 3.37
SCOC-207ENST00000506597 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
SCOC-207ENST00000506597 CECR2Q9BXF3 1484 aa35.65■■■■□ 3.3
SCOC-207ENST00000506597 BICRAQ9NZM4 1560 aa35.57■■■■□ 3.28
SCOC-207ENST00000506597 MROH2BQ7Z745 1585 aa35.5■■■■□ 3.27
SCOC-207ENST00000506597 BAZ1AQ9NRL2 1556 aaPredicted RBP35.45■■■■□ 3.27
SCOC-207ENST00000506597 PABPN1Q86U42 306 aaKnown RBP eCLIP35.39■■■■□ 3.26
SCOC-207ENST00000506597 WIZO95785 1651 aa35.29■■■■□ 3.24
SCOC-207ENST00000506597 SMARCA4P51532 1647 aa35.26■■■■□ 3.24
SCOC-207ENST00000506597 CHIC1Q5VXU3 224 aa35.07■■■■□ 3.2
SCOC-207ENST00000506597 TOP2AP11388 1531 aaKnown RBP34.87■■■■□ 3.17
SCOC-207ENST00000506597 PEG3Q9GZU2 1588 aa34.76■■■■□ 3.16
SCOC-207ENST00000506597 SMARCA2P51531 1590 aa34.58■■■■□ 3.13
SCOC-207ENST00000506597 ATAD2BQ9ULI0 1458 aa34.55■■■■□ 3.12
SCOC-207ENST00000506597 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
SCOC-207ENST00000506597 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
SCOC-207ENST00000506597 BAZ1BQ9UIG0 1483 aaKnown RBP34.42■■■■□ 3.1
SCOC-207ENST00000506597 TRIM41Q8WV44 630 aa34.3■■■■□ 3.08
SCOC-207ENST00000506597 HMGXB3Q12766 1538 aa34.19■■■■□ 3.06
SCOC-207ENST00000506597 NCAPD3P42695 1498 aa34.18■■■■□ 3.06
SCOC-207ENST00000506597 ABCC8Q09428 1581 aa33.96■■■■□ 3.03
SCOC-207ENST00000506597 CC2D2AQ9P2K1 1620 aa33.92■■■■□ 3.02
SCOC-207ENST00000506597 LOC105371045A0A1W2PR82 267 aa33.78■■■■□ 3
SCOC-207ENST00000506597 FAM9AQ8IZU1 332 aaPredicted RBP33.71■■■□□ 2.99
SCOC-207ENST00000506597 WRNQ14191 1432 aaPredicted RBP eCLIP33.66■■■□□ 2.98
SCOC-207ENST00000506597 CFTRP13569 1480 aa33.53■■■□□ 2.96
SCOC-207ENST00000506597 SYNJ1O43426 1573 aa33.53■■■□□ 2.96
SCOC-207ENST00000506597 PRDM2Q13029 1718 aa33.52■■■□□ 2.96
SCOC-207ENST00000506597 TOP2BQ02880 1626 aa33.37■■■□□ 2.93
SCOC-207ENST00000506597 CADPSQ9ULU8 1353 aa33.35■■■□□ 2.93
SCOC-207ENST00000506597 SOGA1O94964 1423 aa33.34■■■□□ 2.93
SCOC-207ENST00000506597 EEA1Q15075 1411 aa33.34■■■□□ 2.93
SCOC-207ENST00000506597 BIVM-ERCC5R4GMW8 1640 aa33.33■■■□□ 2.93
SCOC-207ENST00000506597 EHMT2Q96KQ7 1210 aa33.26■■■□□ 2.92
SCOC-207ENST00000506597 RUSC2Q8N2Y8 1516 aa33.21■■■□□ 2.91
SCOC-207ENST00000506597 CUX1P39880 1505 aa33.17■■■□□ 2.9
SCOC-207ENST00000506597 CSRNP3Q8WYN3 585 aa33.14■■■□□ 2.9
SCOC-207ENST00000506597 LAMC3Q9Y6N6 1575 aa33.02■■■□□ 2.88
SCOC-207ENST00000506597 FANCD2Q9BXW9 1451 aa33.01■■■□□ 2.87
SCOC-207ENST00000506597 NESP48681 1621 aa32.99■■■□□ 2.87
SCOC-207ENST00000506597 GOLGA3Q08378 1498 aa32.92■■■□□ 2.86
SCOC-207ENST00000506597 KIF21BO75037 1637 aa32.92■■■□□ 2.86
SCOC-207ENST00000506597 DNAJC5BQ9UF47 199 aa32.89■■■□□ 2.86
SCOC-207ENST00000506597 CEP164Q9UPV0 1460 aa32.89■■■□□ 2.86
SCOC-207ENST00000506597 TNIKQ9UKE5 1360 aa32.86■■■□□ 2.85
SCOC-207ENST00000506597 UBTFP17480 764 aaKnown RBP32.81■■■□□ 2.84
SCOC-207ENST00000506597 DNMBPQ6XZF7 1577 aa32.79■■■□□ 2.84
SCOC-207ENST00000506597 KIF27Q86VH2 1401 aa32.78■■■□□ 2.84
SCOC-207ENST00000506597 FGD5Q6ZNL6 1462 aa32.77■■■□□ 2.84
SCOC-207ENST00000506597 PDS5BQ9NTI5 1447 aa32.74■■■□□ 2.83
SCOC-207ENST00000506597 CEP162Q5TB80 1403 aa32.74■■■□□ 2.83
SCOC-207ENST00000506597 TOPBP1Q92547 1522 aa32.69■■■□□ 2.82
SCOC-207ENST00000506597 KIF21AQ7Z4S6 1674 aa32.67■■■□□ 2.82
SCOC-207ENST00000506597 RAPGEF2Q9Y4G8 1499 aa32.66■■■□□ 2.82
SCOC-207ENST00000506597 CUX2O14529 1486 aa32.63■■■□□ 2.81
SCOC-207ENST00000506597 ERICH3Q5RHP9 1530 aa32.63■■■□□ 2.81
SCOC-207ENST00000506597 PCGF6Q9BYE7 350 aa32.63■■■□□ 2.81
SCOC-207ENST00000506597 PRXQ9BXM0 1461 aa32.6■■■□□ 2.81
SCOC-207ENST00000506597 URB2Q14146 1524 aaKnown RBP32.57■■■□□ 2.8
SCOC-207ENST00000506597 POLA1P09884 1462 aaPredicted RBP32.56■■■□□ 2.8
SCOC-207ENST00000506597 TRIM26Q12899 539 aaPredicted RBP32.51■■■□□ 2.8
SCOC-207ENST00000506597 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
SCOC-207ENST00000506597 RAD54L2Q9Y4B4 1467 aa32.46■■■□□ 2.79
SCOC-207ENST00000506597 IGF1RP08069 1367 aa32.42■■■□□ 2.78
SCOC-207ENST00000506597 CLIP1P30622 1438 aa32.4■■■□□ 2.78
SCOC-207ENST00000506597 WDR97A6NE52 1622 aa32.38■■■□□ 2.77
SCOC-207ENST00000506597 MRC2Q9UBG0 1479 aa32.3■■■□□ 2.76
SCOC-207ENST00000506597 CARMIL1Q5VZK9 1371 aa32.29■■■□□ 2.76
SCOC-207ENST00000506597 CUL7Q14999 1698 aa32.22■■■□□ 2.75
SCOC-207ENST00000506597 RANGAP1P46060 587 aaPredicted RBP32.21■■■□□ 2.75
SCOC-207ENST00000506597 PPARGC1BQ86YN6 1023 aaKnown RBP32.21■■■□□ 2.75
SCOC-207ENST00000506597 ABCA5Q8WWZ7 1642 aa32.2■■■□□ 2.75
SCOC-207ENST00000506597 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
SCOC-207ENST00000506597 VPS8Q8N3P4 1428 aa32.16■■■□□ 2.74
SCOC-207ENST00000506597 GAPVD1Q14C86 1478 aa32.12■■■□□ 2.73
SCOC-207ENST00000506597 TDRD9Q8NDG6 1382 aaKnown RBP32.12■■■□□ 2.73
SCOC-207ENST00000506597 ERCC6Q03468 1493 aa32.12■■■□□ 2.73
SCOC-207ENST00000506597 WDR62O43379 1518 aa32.11■■■□□ 2.73
SCOC-207ENST00000506597 ARAP1Q96P48 1450 aa32.02■■■□□ 2.72
SCOC-207ENST00000506597 PBRM1Q86U86 1689 aa31.99■■■□□ 2.71
SCOC-207ENST00000506597 CTTNBP2Q8WZ74 1663 aa31.97■■■□□ 2.71
SCOC-207ENST00000506597 THOC2Q8NI27 1593 aaKnown RBP31.96■■■□□ 2.71
SCOC-207ENST00000506597 ARHGAP35Q9NRY4 1499 aa31.96■■■□□ 2.71
SCOC-207ENST00000506597 IFT140Q96RY7 1462 aa31.95■■■□□ 2.71
SCOC-207ENST00000506597 APLP2Q06481 763 aa31.94■■■□□ 2.7
SCOC-207ENST00000506597 TTBK1Q5TCY1 1321 aaPredicted RBP31.92■■■□□ 2.7
SCOC-207ENST00000506597 HRCP23327 699 aa31.91■■■□□ 2.7
SCOC-207ENST00000506597 AQRO60306 1485 aaKnown RBP eCLIP31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms