RNA–Protein interactions for RNA: ENST00000333425.10

PIF1-202, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 1 (best) BASIC

Gene PIF1, Length 2,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-202ENST00000333425 NISCHQ9Y2I1 1504 aa43.19■■■■■ 4.5
PIF1-202ENST00000333425 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
PIF1-202ENST00000333425 ZCCHC6Q5VYS8 1495 aaKnown RBP36.43■■■■□ 3.42
PIF1-202ENST00000333425 SHROOM4Q9ULL8 1493 aa36.37■■■■□ 3.41
PIF1-202ENST00000333425 DCAF8L2P0C7V8 631 aa35.86■■■■□ 3.33
PIF1-202ENST00000333425 DCAF1Q9Y4B6 1507 aa35.5■■■■□ 3.27
PIF1-202ENST00000333425 SUPT5HO00267 1087 aaKnown RBP35.48■■■■□ 3.27
PIF1-202ENST00000333425 MYO15BQ96JP2 1530 aa34.66■■■■□ 3.14
PIF1-202ENST00000333425 ABCC9O60706 1549 aa34.54■■■■□ 3.12
PIF1-202ENST00000333425 SCRIBQ14160 1630 aa34.5■■■■□ 3.11
PIF1-202ENST00000333425 CHIC1Q5VXU3 224 aa34.33■■■■□ 3.09
PIF1-202ENST00000333425 NACADO15069 1562 aa34.3■■■■□ 3.08
PIF1-202ENST00000333425 RSF1Q96T23 1441 aaPredicted RBP33.98■■■■□ 3.03
PIF1-202ENST00000333425 RB1CC1Q8TDY2 1594 aa33.83■■■■□ 3.01
PIF1-202ENST00000333425 CECR2Q9BXF3 1484 aa33.67■■■□□ 2.98
PIF1-202ENST00000333425 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
PIF1-202ENST00000333425 WIZO95785 1651 aa33.33■■■□□ 2.93
PIF1-202ENST00000333425 UNC13AQ9UPW8 1703 aa33.29■■■□□ 2.92
PIF1-202ENST00000333425 LOC105371045A0A1W2PR82 267 aa33.25■■■□□ 2.91
PIF1-202ENST00000333425 BAZ1AQ9NRL2 1556 aaPredicted RBP33.22■■■□□ 2.91
PIF1-202ENST00000333425 TRIM41Q8WV44 630 aa33.14■■■□□ 2.9
PIF1-202ENST00000333425 SMARCA4P51532 1647 aa32.99■■■□□ 2.87
PIF1-202ENST00000333425 PABPN1Q86U42 306 aaKnown RBP eCLIP32.93■■■□□ 2.86
PIF1-202ENST00000333425 BICRAQ9NZM4 1560 aa32.88■■■□□ 2.85
PIF1-202ENST00000333425 TOP2AP11388 1531 aaKnown RBP32.83■■■□□ 2.85
PIF1-202ENST00000333425 FAM9AQ8IZU1 332 aaPredicted RBP32.79■■■□□ 2.84
PIF1-202ENST00000333425 PCGF6Q9BYE7 350 aa32.75■■■□□ 2.83
PIF1-202ENST00000333425 EIF4G1Q04637 1599 aaKnown RBP32.67■■■□□ 2.82
PIF1-202ENST00000333425 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
PIF1-202ENST00000333425 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
PIF1-202ENST00000333425 EHMT2Q96KQ7 1210 aa32.47■■■□□ 2.79
PIF1-202ENST00000333425 HRCP23327 699 aa32.46■■■□□ 2.79
PIF1-202ENST00000333425 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
PIF1-202ENST00000333425 ABCC8Q09428 1581 aa32.38■■■□□ 2.77
PIF1-202ENST00000333425 TRIM26Q12899 539 aaPredicted RBP32.3■■■□□ 2.76
PIF1-202ENST00000333425 ATAD2BQ9ULI0 1458 aa32.24■■■□□ 2.75
PIF1-202ENST00000333425 BAZ1BQ9UIG0 1483 aaKnown RBP32.13■■■□□ 2.73
PIF1-202ENST00000333425 SOGA1O94964 1423 aa32■■■□□ 2.71
PIF1-202ENST00000333425 WRNQ14191 1432 aaPredicted RBP eCLIP31.94■■■□□ 2.7
PIF1-202ENST00000333425 RUSC2Q8N2Y8 1516 aa31.86■■■□□ 2.69
PIF1-202ENST00000333425 EEA1Q15075 1411 aa31.84■■■□□ 2.69
PIF1-202ENST00000333425 CSRNP3Q8WYN3 585 aa31.83■■■□□ 2.69
PIF1-202ENST00000333425 PPARGC1BQ86YN6 1023 aaKnown RBP31.79■■■□□ 2.68
PIF1-202ENST00000333425 SYNJ1O43426 1573 aa31.79■■■□□ 2.68
PIF1-202ENST00000333425 NCAPD3P42695 1498 aa31.73■■■□□ 2.67
PIF1-202ENST00000333425 HMGXB3Q12766 1538 aa31.68■■■□□ 2.66
PIF1-202ENST00000333425 TNIKQ9UKE5 1360 aa31.67■■■□□ 2.66
PIF1-202ENST00000333425 CEP162Q5TB80 1403 aa31.65■■■□□ 2.66
PIF1-202ENST00000333425 UBTFP17480 764 aaKnown RBP31.63■■■□□ 2.65
PIF1-202ENST00000333425 GOLGA3Q08378 1498 aa31.56■■■□□ 2.64
PIF1-202ENST00000333425 TOP2BQ02880 1626 aa31.47■■■□□ 2.63
PIF1-202ENST00000333425 CEP164Q9UPV0 1460 aa31.44■■■□□ 2.62
PIF1-202ENST00000333425 ZEB1P37275 1124 aaPredicted RBP31.41■■■□□ 2.62
PIF1-202ENST00000333425 KIF21BO75037 1637 aa31.41■■■□□ 2.62
PIF1-202ENST00000333425 BIVM-ERCC5R4GMW8 1640 aa31.37■■■□□ 2.61
PIF1-202ENST00000333425 CFTRP13569 1480 aa31.33■■■□□ 2.61
PIF1-202ENST00000333425 TTBK1Q5TCY1 1321 aaPredicted RBP31.3■■■□□ 2.6
PIF1-202ENST00000333425 CUX1P39880 1505 aa31.25■■■□□ 2.59
PIF1-202ENST00000333425 RAPGEF2Q9Y4G8 1499 aa31.25■■■□□ 2.59
PIF1-202ENST00000333425 CLIP1P30622 1438 aa31.17■■■□□ 2.58
PIF1-202ENST00000333425 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
PIF1-202ENST00000333425 PRDM2Q13029 1718 aa31.09■■■□□ 2.57
PIF1-202ENST00000333425 CADPSQ9ULU8 1353 aa31.07■■■□□ 2.56
PIF1-202ENST00000333425 RANGAP1P46060 587 aaPredicted RBP31.05■■■□□ 2.56
PIF1-202ENST00000333425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.05■■■□□ 2.56
PIF1-202ENST00000333425 PRXQ9BXM0 1461 aa31.03■■■□□ 2.56
PIF1-202ENST00000333425 KIF27Q86VH2 1401 aa31.01■■■□□ 2.55
PIF1-202ENST00000333425 ERICH3Q5RHP9 1530 aa30.99■■■□□ 2.55
PIF1-202ENST00000333425 VPS8Q8N3P4 1428 aa30.98■■■□□ 2.55
PIF1-202ENST00000333425 CCER1Q8TC90 406 aaPredicted RBP30.96■■■□□ 2.55
PIF1-202ENST00000333425 APLP2Q06481 763 aa30.85■■■□□ 2.53
PIF1-202ENST00000333425 CUX2O14529 1486 aa30.79■■■□□ 2.52
PIF1-202ENST00000333425 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.52
PIF1-202ENST00000333425 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.51
PIF1-202ENST00000333425 ARAP1Q96P48 1450 aa30.72■■■□□ 2.51
PIF1-202ENST00000333425 IGF1RP08069 1367 aa30.71■■■□□ 2.51
PIF1-202ENST00000333425 NESP48681 1621 aa30.65■■■□□ 2.5
PIF1-202ENST00000333425 HNRNPUL2Q1KMD3 747 aaKnown RBP30.62■■■□□ 2.49
PIF1-202ENST00000333425 CARMIL1Q5VZK9 1371 aa30.58■■■□□ 2.49
PIF1-202ENST00000333425 DNAJC5BQ9UF47 199 aa30.56■■■□□ 2.48
PIF1-202ENST00000333425 DNMBPQ6XZF7 1577 aa30.55■■■□□ 2.48
PIF1-202ENST00000333425 ARHGAP35Q9NRY4 1499 aa30.54■■■□□ 2.48
PIF1-202ENST00000333425 TOPBP1Q92547 1522 aa30.51■■■□□ 2.47
PIF1-202ENST00000333425 RAD54L2Q9Y4B4 1467 aa30.5■■■□□ 2.47
PIF1-202ENST00000333425 KANK4Q5T7N3 995 aaPredicted RBP30.49■■■□□ 2.47
PIF1-202ENST00000333425 POLA1P09884 1462 aaPredicted RBP30.45■■■□□ 2.47
PIF1-202ENST00000333425 LAMC3Q9Y6N6 1575 aa30.44■■■□□ 2.46
PIF1-202ENST00000333425 ABCA10Q8WWZ4 1543 aa30.41■■■□□ 2.46
PIF1-202ENST00000333425 URB2Q14146 1524 aaKnown RBP30.33■■■□□ 2.45
PIF1-202ENST00000333425 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
PIF1-202ENST00000333425 P3H3Q8IVL6 736 aa30.2■■■□□ 2.42
PIF1-202ENST00000333425 CUL7Q14999 1698 aa30.2■■■□□ 2.42
PIF1-202ENST00000333425 RRBP1Q9P2E9 1410 aaKnown RBP30.19■■■□□ 2.42
PIF1-202ENST00000333425 WDR97A6NE52 1622 aa30.17■■■□□ 2.42
PIF1-202ENST00000333425 KIF21AQ7Z4S6 1674 aa30.14■■■□□ 2.42
PIF1-202ENST00000333425 TDRD9Q8NDG6 1382 aaKnown RBP30.14■■■□□ 2.42
PIF1-202ENST00000333425 TIAM1Q13009 1591 aa30.13■■■□□ 2.41
PIF1-202ENST00000333425 MAP3K1Q13233 1512 aa30.11■■■□□ 2.41
PIF1-202ENST00000333425 FHAD1B1AJZ9 1412 aa30.11■■■□□ 2.41
PIF1-202ENST00000333425 CCNB3Q8WWL7 1395 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms