Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGA11Q9Y5H2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGA11Q9Y5H2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDHGA11Q9Y5H2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGA11Q9Y5H2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGA11Q9Y5H2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHGA11Q9Y5H2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.76■■□□□ 1.55
PCDHGA11Q9Y5H2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.76■■□□□ 1.55
PCDHGA11Q9Y5H2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGA11Q9Y5H2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGA11Q9Y5H2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHGA11Q9Y5H2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA11Q9Y5H2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA11Q9Y5H2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA11Q9Y5H2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA11Q9Y5H2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA11Q9Y5H2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA11Q9Y5H2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHGA11Q9Y5H2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHGA11Q9Y5H2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.72■■□□□ 1.55
PCDHGA11Q9Y5H2 AC044849.2-201ENST00000606596 710 ntBASIC24.72■■□□□ 1.55
PCDHGA11Q9Y5H2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHGA11Q9Y5H2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGA11Q9Y5H2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
PCDHGA11Q9Y5H2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGA11Q9Y5H2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGA11Q9Y5H2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGA11Q9Y5H2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGA11Q9Y5H2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHGA11Q9Y5H2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGA11Q9Y5H2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.7■■□□□ 1.54
PCDHGA11Q9Y5H2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGA11Q9Y5H2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGA11Q9Y5H2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGA11Q9Y5H2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PCDHGA11Q9Y5H2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGA11Q9Y5H2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHGA11Q9Y5H2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHGA11Q9Y5H2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGA11Q9Y5H2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGA11Q9Y5H2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.68■■□□□ 1.54
PCDHGA11Q9Y5H2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGA11Q9Y5H2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGA11Q9Y5H2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGA11Q9Y5H2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGA11Q9Y5H2 AC135983.2-203ENST00000454486 1613 ntBASIC24.66■■□□□ 1.54
PCDHGA11Q9Y5H2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGA11Q9Y5H2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHGA11Q9Y5H2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGA11Q9Y5H2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGA11Q9Y5H2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGA11Q9Y5H2 AC100797.4-201ENST00000631653 1827 ntBASIC24.65■■□□□ 1.54
PCDHGA11Q9Y5H2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA11Q9Y5H2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PCDHGA11Q9Y5H2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHGA11Q9Y5H2 LINC00273-201ENST00000539813 1452 ntBASIC24.64■■□□□ 1.54
PCDHGA11Q9Y5H2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
PCDHGA11Q9Y5H2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGA11Q9Y5H2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA11Q9Y5H2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA11Q9Y5H2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.63■■□□□ 1.53
PCDHGA11Q9Y5H2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PCDHGA11Q9Y5H2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
PCDHGA11Q9Y5H2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHGA11Q9Y5H2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDHGA11Q9Y5H2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA11Q9Y5H2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHGA11Q9Y5H2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHGA11Q9Y5H2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGA11Q9Y5H2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHGA11Q9Y5H2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.61■■□□□ 1.53
PCDHGA11Q9Y5H2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGA11Q9Y5H2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGA11Q9Y5H2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHGA11Q9Y5H2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHGA11Q9Y5H2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGA11Q9Y5H2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHGA11Q9Y5H2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
PCDHGA11Q9Y5H2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.59■■□□□ 1.53
PCDHGA11Q9Y5H2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGA11Q9Y5H2 WHAMMP2-203ENST00000563942 1603 ntBASIC24.58■■□□□ 1.53
PCDHGA11Q9Y5H2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGA11Q9Y5H2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGA11Q9Y5H2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGA11Q9Y5H2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
PCDHGA11Q9Y5H2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHGA11Q9Y5H2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGA11Q9Y5H2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PCDHGA11Q9Y5H2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.56■■□□□ 1.52
PCDHGA11Q9Y5H2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
PCDHGA11Q9Y5H2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA11Q9Y5H2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
PCDHGA11Q9Y5H2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA11Q9Y5H2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA11Q9Y5H2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA11Q9Y5H2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA11Q9Y5H2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGA11Q9Y5H2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHGA11Q9Y5H2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHGA11Q9Y5H2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms