Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
PCDHGA11Q9Y5H2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCDHGA11Q9Y5H2 AL356512.1-201ENST00000607453 1739 ntBASIC31.95■■■□□ 2.7
PCDHGA11Q9Y5H2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
PCDHGA11Q9Y5H2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.71■■■□□ 2.67
PCDHGA11Q9Y5H2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PCDHGA11Q9Y5H2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.52■■■□□ 2.64
PCDHGA11Q9Y5H2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PCDHGA11Q9Y5H2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
PCDHGA11Q9Y5H2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.38■■■□□ 2.61
PCDHGA11Q9Y5H2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.1■■■□□ 2.57
PCDHGA11Q9Y5H2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHGA11Q9Y5H2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.94■■■□□ 2.54
PCDHGA11Q9Y5H2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHGA11Q9Y5H2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
PCDHGA11Q9Y5H2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PCDHGA11Q9Y5H2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
PCDHGA11Q9Y5H2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
PCDHGA11Q9Y5H2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCDHGA11Q9Y5H2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PCDHGA11Q9Y5H2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.18■■■□□ 2.42
PCDHGA11Q9Y5H2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.14■■■□□ 2.42
PCDHGA11Q9Y5H2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHGA11Q9Y5H2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.02■■■□□ 2.4
PCDHGA11Q9Y5H2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHGA11Q9Y5H2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
PCDHGA11Q9Y5H2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCDHGA11Q9Y5H2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
PCDHGA11Q9Y5H2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
PCDHGA11Q9Y5H2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.77■■■□□ 2.36
PCDHGA11Q9Y5H2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
PCDHGA11Q9Y5H2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHGA11Q9Y5H2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.63■■■□□ 2.33
PCDHGA11Q9Y5H2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
PCDHGA11Q9Y5H2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHGA11Q9Y5H2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHGA11Q9Y5H2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
PCDHGA11Q9Y5H2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHGA11Q9Y5H2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.52■■■□□ 2.32
PCDHGA11Q9Y5H2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.45■■■□□ 2.31
PCDHGA11Q9Y5H2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.38■■■□□ 2.29
PCDHGA11Q9Y5H2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHGA11Q9Y5H2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PCDHGA11Q9Y5H2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.12■■■□□ 2.25
PCDHGA11Q9Y5H2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PCDHGA11Q9Y5H2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
PCDHGA11Q9Y5H2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.86■■■□□ 2.21
PCDHGA11Q9Y5H2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCDHGA11Q9Y5H2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDHGA11Q9Y5H2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PCDHGA11Q9Y5H2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.8■■■□□ 2.2
PCDHGA11Q9Y5H2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDHGA11Q9Y5H2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHGA11Q9Y5H2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
PCDHGA11Q9Y5H2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.72■■■□□ 2.19
PCDHGA11Q9Y5H2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCDHGA11Q9Y5H2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHGA11Q9Y5H2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHGA11Q9Y5H2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.65■■■□□ 2.18
PCDHGA11Q9Y5H2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHGA11Q9Y5H2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHGA11Q9Y5H2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHGA11Q9Y5H2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHGA11Q9Y5H2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.57■■■□□ 2.16
PCDHGA11Q9Y5H2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.54■■■□□ 2.16
PCDHGA11Q9Y5H2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHGA11Q9Y5H2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
PCDHGA11Q9Y5H2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCDHGA11Q9Y5H2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHGA11Q9Y5H2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
PCDHGA11Q9Y5H2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHGA11Q9Y5H2 AC015813.7-201ENST00000623294 581 ntBASIC28.36■■■□□ 2.13
PCDHGA11Q9Y5H2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHGA11Q9Y5H2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDHGA11Q9Y5H2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHGA11Q9Y5H2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHGA11Q9Y5H2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHGA11Q9Y5H2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHGA11Q9Y5H2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
PCDHGA11Q9Y5H2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
PCDHGA11Q9Y5H2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.19■■■□□ 2.1
PCDHGA11Q9Y5H2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHGA11Q9Y5H2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PCDHGA11Q9Y5H2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHGA11Q9Y5H2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHGA11Q9Y5H2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHGA11Q9Y5H2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHGA11Q9Y5H2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.04■■■□□ 2.08
PCDHGA11Q9Y5H2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHGA11Q9Y5H2 AC145285.7-201ENST00000614819 1539 ntBASIC28.02■■■□□ 2.08
PCDHGA11Q9Y5H2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28■■■□□ 2.07
PCDHGA11Q9Y5H2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.98■■■□□ 2.07
PCDHGA11Q9Y5H2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHGA11Q9Y5H2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHGA11Q9Y5H2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PCDHGA11Q9Y5H2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PCDHGA11Q9Y5H2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.89■■■□□ 2.06
PCDHGA11Q9Y5H2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCDHGA11Q9Y5H2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHGA11Q9Y5H2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.83■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms