Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DENND2AQ9ULE3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.35■■■□□ 2.61
DENND2AQ9ULE3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
DENND2AQ9ULE3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
DENND2AQ9ULE3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
DENND2AQ9ULE3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DENND2AQ9ULE3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
DENND2AQ9ULE3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.33■■■□□ 2.61
DENND2AQ9ULE3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.32■■■□□ 2.6
DENND2AQ9ULE3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.31■■■□□ 2.6
DENND2AQ9ULE3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DENND2AQ9ULE3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DENND2AQ9ULE3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DENND2AQ9ULE3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.3■■■□□ 2.6
DENND2AQ9ULE3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
DENND2AQ9ULE3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
DENND2AQ9ULE3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
DENND2AQ9ULE3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
DENND2AQ9ULE3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
DENND2AQ9ULE3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
DENND2AQ9ULE3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.28■■■□□ 2.6
DENND2AQ9ULE3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.27■■■□□ 2.6
DENND2AQ9ULE3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
DENND2AQ9ULE3 ABCB10P1-201ENST00000614297 2181 ntBASIC31.26■■■□□ 2.6
DENND2AQ9ULE3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
DENND2AQ9ULE3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
DENND2AQ9ULE3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
DENND2AQ9ULE3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
DENND2AQ9ULE3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
DENND2AQ9ULE3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
DENND2AQ9ULE3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
DENND2AQ9ULE3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
DENND2AQ9ULE3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
DENND2AQ9ULE3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
DENND2AQ9ULE3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
DENND2AQ9ULE3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
DENND2AQ9ULE3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
DENND2AQ9ULE3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
DENND2AQ9ULE3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
DENND2AQ9ULE3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
DENND2AQ9ULE3 HSD17B1P1-201ENST00000590052 955 ntBASIC31.24■■■□□ 2.59
DENND2AQ9ULE3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.23■■■□□ 2.59
DENND2AQ9ULE3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.23■■■□□ 2.59
DENND2AQ9ULE3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
DENND2AQ9ULE3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.22■■■□□ 2.59
DENND2AQ9ULE3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.22■■■□□ 2.59
DENND2AQ9ULE3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
DENND2AQ9ULE3 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.22■■■□□ 2.59
DENND2AQ9ULE3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
DENND2AQ9ULE3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.21■■■□□ 2.59
DENND2AQ9ULE3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
DENND2AQ9ULE3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
DENND2AQ9ULE3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.21■■■□□ 2.59
DENND2AQ9ULE3 AC008813.1-201ENST00000536597 885 ntBASIC31.2■■■□□ 2.59
DENND2AQ9ULE3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.2■■■□□ 2.59
DENND2AQ9ULE3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.2■■■□□ 2.58
DENND2AQ9ULE3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
DENND2AQ9ULE3 AC110285.7-201ENST00000624417 1536 ntBASIC31.19■■■□□ 2.58
DENND2AQ9ULE3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
DENND2AQ9ULE3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.19■■■□□ 2.58
DENND2AQ9ULE3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
DENND2AQ9ULE3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.19■■■□□ 2.58
DENND2AQ9ULE3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
DENND2AQ9ULE3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
DENND2AQ9ULE3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
DENND2AQ9ULE3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.17■■■□□ 2.58
DENND2AQ9ULE3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
DENND2AQ9ULE3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
DENND2AQ9ULE3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.16■■■□□ 2.58
DENND2AQ9ULE3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
DENND2AQ9ULE3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
DENND2AQ9ULE3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.14■■■□□ 2.58
DENND2AQ9ULE3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.57
DENND2AQ9ULE3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DENND2AQ9ULE3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
DENND2AQ9ULE3 AP004833.2-201ENST00000532228 1454 ntBASIC31.13■■■□□ 2.57
DENND2AQ9ULE3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.13■■■□□ 2.57
DENND2AQ9ULE3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
DENND2AQ9ULE3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DENND2AQ9ULE3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DENND2AQ9ULE3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DENND2AQ9ULE3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
DENND2AQ9ULE3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
DENND2AQ9ULE3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
DENND2AQ9ULE3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
DENND2AQ9ULE3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
DENND2AQ9ULE3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
DENND2AQ9ULE3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
DENND2AQ9ULE3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
DENND2AQ9ULE3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
DENND2AQ9ULE3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
DENND2AQ9ULE3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
DENND2AQ9ULE3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
DENND2AQ9ULE3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.07■■■□□ 2.56
DENND2AQ9ULE3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.07■■■□□ 2.56
DENND2AQ9ULE3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.07■■■□□ 2.56
DENND2AQ9ULE3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.06■■■□□ 2.56
DENND2AQ9ULE3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
DENND2AQ9ULE3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.06■■■□□ 2.56
DENND2AQ9ULE3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms