Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
BRF2Q9HAW0 AC087741.3-201ENST00000624270 1347 ntBASIC24.58■■□□□ 1.52
BRF2Q9HAW0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.57■■□□□ 1.52
BRF2Q9HAW0 AC100797.4-201ENST00000631653 1827 ntBASIC24.57■■□□□ 1.52
BRF2Q9HAW0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRF2Q9HAW0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRF2Q9HAW0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRF2Q9HAW0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
BRF2Q9HAW0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
BRF2Q9HAW0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRF2Q9HAW0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
BRF2Q9HAW0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.56■■□□□ 1.52
BRF2Q9HAW0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRF2Q9HAW0 AC135983.2-203ENST00000454486 1613 ntBASIC24.56■■□□□ 1.52
BRF2Q9HAW0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRF2Q9HAW0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
BRF2Q9HAW0 AL162393.1-201ENST00000437852 946 ntBASIC24.55■■□□□ 1.52
BRF2Q9HAW0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.55■■□□□ 1.52
BRF2Q9HAW0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BRF2Q9HAW0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
BRF2Q9HAW0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.54■■□□□ 1.52
BRF2Q9HAW0 LINC00273-201ENST00000539813 1452 ntBASIC24.53■■□□□ 1.52
BRF2Q9HAW0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
BRF2Q9HAW0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
BRF2Q9HAW0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.53■■□□□ 1.52
BRF2Q9HAW0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.53■■□□□ 1.52
BRF2Q9HAW0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.52■■□□□ 1.52
BRF2Q9HAW0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
BRF2Q9HAW0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
BRF2Q9HAW0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
BRF2Q9HAW0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
BRF2Q9HAW0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
BRF2Q9HAW0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
BRF2Q9HAW0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
BRF2Q9HAW0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
BRF2Q9HAW0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
BRF2Q9HAW0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.51■■□□□ 1.51
BRF2Q9HAW0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
BRF2Q9HAW0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
BRF2Q9HAW0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
BRF2Q9HAW0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BRF2Q9HAW0 AC044849.2-201ENST00000606596 710 ntBASIC24.5■■□□□ 1.51
BRF2Q9HAW0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.5■■□□□ 1.51
BRF2Q9HAW0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BRF2Q9HAW0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
BRF2Q9HAW0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.49■■□□□ 1.51
BRF2Q9HAW0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
BRF2Q9HAW0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.49■■□□□ 1.51
BRF2Q9HAW0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
BRF2Q9HAW0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.48■■□□□ 1.51
BRF2Q9HAW0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.47■■□□□ 1.51
BRF2Q9HAW0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
BRF2Q9HAW0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
BRF2Q9HAW0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
BRF2Q9HAW0 WHAMMP2-203ENST00000563942 1603 ntBASIC24.46■■□□□ 1.51
BRF2Q9HAW0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.46■■□□□ 1.51
BRF2Q9HAW0 BX255925.1-201ENST00000566954 1854 ntBASIC24.46■■□□□ 1.51
BRF2Q9HAW0 AP002414.2-202ENST00000590929 1450 ntBASIC24.45■■□□□ 1.51
BRF2Q9HAW0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.45■■□□□ 1.5
BRF2Q9HAW0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BRF2Q9HAW0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRF2Q9HAW0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BRF2Q9HAW0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRF2Q9HAW0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRF2Q9HAW0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.43■■□□□ 1.5
BRF2Q9HAW0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
BRF2Q9HAW0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
BRF2Q9HAW0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
BRF2Q9HAW0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BRF2Q9HAW0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
BRF2Q9HAW0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BRF2Q9HAW0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.41■■□□□ 1.5
BRF2Q9HAW0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
BRF2Q9HAW0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
BRF2Q9HAW0 LINC01003-201ENST00000564834 1764 ntBASIC24.39■■□□□ 1.5
BRF2Q9HAW0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.39■■□□□ 1.5
BRF2Q9HAW0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.39■■□□□ 1.5
BRF2Q9HAW0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
BRF2Q9HAW0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BRF2Q9HAW0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.39■■□□□ 1.49
BRF2Q9HAW0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
BRF2Q9HAW0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BRF2Q9HAW0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BRF2Q9HAW0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
BRF2Q9HAW0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRF2Q9HAW0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRF2Q9HAW0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
BRF2Q9HAW0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRF2Q9HAW0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.38■■□□□ 1.49
BRF2Q9HAW0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.38■■□□□ 1.49
BRF2Q9HAW0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.38■■□□□ 1.49
BRF2Q9HAW0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.37■■□□□ 1.49
BRF2Q9HAW0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
BRF2Q9HAW0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.37■■□□□ 1.49
BRF2Q9HAW0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
BRF2Q9HAW0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
BRF2Q9HAW0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.36■■□□□ 1.49
BRF2Q9HAW0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
BRF2Q9HAW0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.36■■□□□ 1.49
BRF2Q9HAW0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms