Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
EFCC1Q9HA90 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.11■■■□□ 2.41
EFCC1Q9HA90 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
EFCC1Q9HA90 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
EFCC1Q9HA90 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
EFCC1Q9HA90 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
EFCC1Q9HA90 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.08■■■□□ 2.41
EFCC1Q9HA90 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
EFCC1Q9HA90 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
EFCC1Q9HA90 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
EFCC1Q9HA90 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.07■■■□□ 2.4
EFCC1Q9HA90 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
EFCC1Q9HA90 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.07■■■□□ 2.4
EFCC1Q9HA90 LINC00273-201ENST00000539813 1452 ntBASIC30.06■■■□□ 2.4
EFCC1Q9HA90 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
EFCC1Q9HA90 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
EFCC1Q9HA90 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
EFCC1Q9HA90 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
EFCC1Q9HA90 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.05■■■□□ 2.4
EFCC1Q9HA90 U85056.1-201ENST00000616429 682 ntBASIC30.04■■■□□ 2.4
EFCC1Q9HA90 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.04■■■□□ 2.4
EFCC1Q9HA90 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC30.03■■■□□ 2.4
EFCC1Q9HA90 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.03■■■□□ 2.4
EFCC1Q9HA90 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.03■■■□□ 2.4
EFCC1Q9HA90 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
EFCC1Q9HA90 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.02■■■□□ 2.4
EFCC1Q9HA90 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.39
EFCC1Q9HA90 AC010864.1-201ENST00000609407 1511 ntBASIC30.01■■■□□ 2.39
EFCC1Q9HA90 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30■■■□□ 2.39
EFCC1Q9HA90 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.99■■■□□ 2.39
EFCC1Q9HA90 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
EFCC1Q9HA90 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.99■■■□□ 2.39
EFCC1Q9HA90 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
EFCC1Q9HA90 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
EFCC1Q9HA90 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
EFCC1Q9HA90 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
EFCC1Q9HA90 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
EFCC1Q9HA90 TSPY13P-201ENST00000338964 914 ntBASIC29.96■■■□□ 2.39
EFCC1Q9HA90 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.96■■■□□ 2.39
EFCC1Q9HA90 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
EFCC1Q9HA90 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
EFCC1Q9HA90 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.94■■■□□ 2.38
EFCC1Q9HA90 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
EFCC1Q9HA90 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
EFCC1Q9HA90 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.93■■■□□ 2.38
EFCC1Q9HA90 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.93■■■□□ 2.38
EFCC1Q9HA90 RARRES2P1-201ENST00000474487 481 ntBASIC29.93■■■□□ 2.38
EFCC1Q9HA90 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
EFCC1Q9HA90 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
EFCC1Q9HA90 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
EFCC1Q9HA90 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
EFCC1Q9HA90 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
EFCC1Q9HA90 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.9■■■□□ 2.38
EFCC1Q9HA90 AC004987.1-201ENST00000428627 508 ntBASIC29.89■■■□□ 2.38
EFCC1Q9HA90 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.89■■■□□ 2.38
EFCC1Q9HA90 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
EFCC1Q9HA90 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
EFCC1Q9HA90 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
EFCC1Q9HA90 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
EFCC1Q9HA90 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.87■■■□□ 2.37
EFCC1Q9HA90 ATP5G2P3-201ENST00000429083 425 ntBASIC29.86■■■□□ 2.37
EFCC1Q9HA90 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
EFCC1Q9HA90 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.86■■■□□ 2.37
EFCC1Q9HA90 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.85■■■□□ 2.37
EFCC1Q9HA90 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.85■■■□□ 2.37
EFCC1Q9HA90 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
EFCC1Q9HA90 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
EFCC1Q9HA90 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.84■■■□□ 2.37
EFCC1Q9HA90 KRT18P60-201ENST00000312876 1297 ntBASIC29.83■■■□□ 2.37
EFCC1Q9HA90 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.83■■■□□ 2.37
EFCC1Q9HA90 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
EFCC1Q9HA90 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
EFCC1Q9HA90 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
EFCC1Q9HA90 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
EFCC1Q9HA90 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
EFCC1Q9HA90 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
EFCC1Q9HA90 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.81■■■□□ 2.36
EFCC1Q9HA90 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
EFCC1Q9HA90 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
EFCC1Q9HA90 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
EFCC1Q9HA90 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
EFCC1Q9HA90 AC060814.1-201ENST00000554326 538 ntBASIC29.8■■■□□ 2.36
EFCC1Q9HA90 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
EFCC1Q9HA90 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
EFCC1Q9HA90 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
EFCC1Q9HA90 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
EFCC1Q9HA90 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.8■■■□□ 2.36
EFCC1Q9HA90 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
EFCC1Q9HA90 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
EFCC1Q9HA90 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
EFCC1Q9HA90 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
EFCC1Q9HA90 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.78■■■□□ 2.36
EFCC1Q9HA90 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
EFCC1Q9HA90 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
EFCC1Q9HA90 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
EFCC1Q9HA90 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
EFCC1Q9HA90 AC127502.1-201ENST00000399971 1502 ntBASIC29.76■■■□□ 2.36
EFCC1Q9HA90 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
EFCC1Q9HA90 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
EFCC1Q9HA90 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms