Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LRRC40Q9H9A6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
LRRC40Q9H9A6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.03■■□□□ 1.76
LRRC40Q9H9A6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
LRRC40Q9H9A6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LRRC40Q9H9A6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LRRC40Q9H9A6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.02■■□□□ 1.76
LRRC40Q9H9A6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.02■■□□□ 1.76
LRRC40Q9H9A6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
LRRC40Q9H9A6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
LRRC40Q9H9A6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
LRRC40Q9H9A6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
LRRC40Q9H9A6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
LRRC40Q9H9A6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
LRRC40Q9H9A6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
LRRC40Q9H9A6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
LRRC40Q9H9A6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26■■□□□ 1.75
LRRC40Q9H9A6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
LRRC40Q9H9A6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.99■■□□□ 1.75
LRRC40Q9H9A6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
LRRC40Q9H9A6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.99■■□□□ 1.75
LRRC40Q9H9A6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
LRRC40Q9H9A6 AC100797.4-201ENST00000631653 1827 ntBASIC25.98■■□□□ 1.75
LRRC40Q9H9A6 AC044849.2-201ENST00000606596 710 ntBASIC25.98■■□□□ 1.75
LRRC40Q9H9A6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
LRRC40Q9H9A6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
LRRC40Q9H9A6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
LRRC40Q9H9A6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
LRRC40Q9H9A6 AC135983.2-203ENST00000454486 1613 ntBASIC25.97■■□□□ 1.75
LRRC40Q9H9A6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
LRRC40Q9H9A6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.97■■□□□ 1.75
LRRC40Q9H9A6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.96■■□□□ 1.75
LRRC40Q9H9A6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.96■■□□□ 1.75
LRRC40Q9H9A6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
LRRC40Q9H9A6 LINC00273-201ENST00000539813 1452 ntBASIC25.96■■□□□ 1.75
LRRC40Q9H9A6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
LRRC40Q9H9A6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
LRRC40Q9H9A6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
LRRC40Q9H9A6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
LRRC40Q9H9A6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.95■■□□□ 1.74
LRRC40Q9H9A6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
LRRC40Q9H9A6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LRRC40Q9H9A6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.94■■□□□ 1.74
LRRC40Q9H9A6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
LRRC40Q9H9A6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LRRC40Q9H9A6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.94■■□□□ 1.74
LRRC40Q9H9A6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.94■■□□□ 1.74
LRRC40Q9H9A6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LRRC40Q9H9A6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.92■■□□□ 1.74
LRRC40Q9H9A6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.92■■□□□ 1.74
LRRC40Q9H9A6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.91■■□□□ 1.74
LRRC40Q9H9A6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LRRC40Q9H9A6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
LRRC40Q9H9A6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
LRRC40Q9H9A6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
LRRC40Q9H9A6 WHAMMP2-203ENST00000563942 1603 ntBASIC25.91■■□□□ 1.74
LRRC40Q9H9A6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC40Q9H9A6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC40Q9H9A6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC40Q9H9A6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC40Q9H9A6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC40Q9H9A6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
LRRC40Q9H9A6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
LRRC40Q9H9A6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.89■■□□□ 1.74
LRRC40Q9H9A6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.89■■□□□ 1.74
LRRC40Q9H9A6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
LRRC40Q9H9A6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
LRRC40Q9H9A6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.88■■□□□ 1.73
LRRC40Q9H9A6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
LRRC40Q9H9A6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
LRRC40Q9H9A6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LRRC40Q9H9A6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
LRRC40Q9H9A6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
LRRC40Q9H9A6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.87■■□□□ 1.73
LRRC40Q9H9A6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LRRC40Q9H9A6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LRRC40Q9H9A6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
LRRC40Q9H9A6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
LRRC40Q9H9A6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.86■■□□□ 1.73
LRRC40Q9H9A6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LRRC40Q9H9A6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
LRRC40Q9H9A6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LRRC40Q9H9A6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LRRC40Q9H9A6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LRRC40Q9H9A6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.85■■□□□ 1.73
LRRC40Q9H9A6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.85■■□□□ 1.73
LRRC40Q9H9A6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.85■■□□□ 1.73
LRRC40Q9H9A6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LRRC40Q9H9A6 AP002414.2-202ENST00000590929 1450 ntBASIC25.84■■□□□ 1.73
LRRC40Q9H9A6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
LRRC40Q9H9A6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LRRC40Q9H9A6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LRRC40Q9H9A6 BX255925.1-201ENST00000566954 1854 ntBASIC25.82■■□□□ 1.72
LRRC40Q9H9A6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
LRRC40Q9H9A6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.82■■□□□ 1.72
LRRC40Q9H9A6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.81■■□□□ 1.72
LRRC40Q9H9A6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LRRC40Q9H9A6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LRRC40Q9H9A6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.8■■□□□ 1.72
LRRC40Q9H9A6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms