Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF2Q99496 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF2Q99496 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF2Q99496 BX255925.1-201ENST00000566954 1854 ntBASIC20.14■□□□□ 0.81
RNF2Q99496 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF2Q99496 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF2Q99496 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF2Q99496 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RNF2Q99496 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF2Q99496 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF2Q99496 AP004833.2-201ENST00000532228 1454 ntBASIC20.13■□□□□ 0.81
RNF2Q99496 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF2Q99496 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF2Q99496 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF2Q99496 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF2Q99496 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF2Q99496 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF2Q99496 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RNF2Q99496 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF2Q99496 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF2Q99496 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF2Q99496 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF2Q99496 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF2Q99496 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF2Q99496 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF2Q99496 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF2Q99496 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF2Q99496 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RNF2Q99496 MIR762-201ENST00000390236 83 ntBASIC20.1■□□□□ 0.81
RNF2Q99496 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF2Q99496 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF2Q99496 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF2Q99496 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF2Q99496 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF2Q99496 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RNF2Q99496 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.08■□□□□ 0.81
RNF2Q99496 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.08■□□□□ 0.8
RNF2Q99496 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF2Q99496 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RNF2Q99496 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RNF2Q99496 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF2Q99496 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RNF2Q99496 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF2Q99496 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF2Q99496 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF2Q99496 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF2Q99496 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF2Q99496 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.07■□□□□ 0.8
RNF2Q99496 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF2Q99496 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF2Q99496 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF2Q99496 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF2Q99496 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF2Q99496 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF2Q99496 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RNF2Q99496 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF2Q99496 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.06■□□□□ 0.8
RNF2Q99496 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF2Q99496 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF2Q99496 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RNF2Q99496 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF2Q99496 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RNF2Q99496 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF2Q99496 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF2Q99496 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF2Q99496 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF2Q99496 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF2Q99496 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.04■□□□□ 0.8
RNF2Q99496 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF2Q99496 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF2Q99496 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF2Q99496 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF2Q99496 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF2Q99496 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF2Q99496 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF2Q99496 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF2Q99496 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF2Q99496 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF2Q99496 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF2Q99496 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF2Q99496 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF2Q99496 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF2Q99496 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF2Q99496 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF2Q99496 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF2Q99496 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20■□□□□ 0.79
RNF2Q99496 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20■□□□□ 0.79
RNF2Q99496 AC005559.1-201ENST00000589661 871 ntBASIC20■□□□□ 0.79
RNF2Q99496 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF2Q99496 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF2Q99496 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF2Q99496 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RNF2Q99496 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF2Q99496 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.98■□□□□ 0.79
RNF2Q99496 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF2Q99496 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF2Q99496 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF2Q99496 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF2Q99496 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF2Q99496 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms