Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RFWD2Q8NHY2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
RFWD2Q8NHY2 AL449106.1-201ENST00000608517 1980 ntBASIC25.28■■□□□ 1.64
RFWD2Q8NHY2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.28■■□□□ 1.64
RFWD2Q8NHY2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.28■■□□□ 1.64
RFWD2Q8NHY2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RFWD2Q8NHY2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.27■■□□□ 1.64
RFWD2Q8NHY2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RFWD2Q8NHY2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RFWD2Q8NHY2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.27■■□□□ 1.64
RFWD2Q8NHY2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RFWD2Q8NHY2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RFWD2Q8NHY2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
RFWD2Q8NHY2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.26■■□□□ 1.63
RFWD2Q8NHY2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.25■■□□□ 1.63
RFWD2Q8NHY2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RFWD2Q8NHY2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RFWD2Q8NHY2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
RFWD2Q8NHY2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.24■■□□□ 1.63
RFWD2Q8NHY2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RFWD2Q8NHY2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RFWD2Q8NHY2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
RFWD2Q8NHY2 LINC01003-201ENST00000564834 1764 ntBASIC25.23■■□□□ 1.63
RFWD2Q8NHY2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RFWD2Q8NHY2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RFWD2Q8NHY2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RFWD2Q8NHY2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RFWD2Q8NHY2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
RFWD2Q8NHY2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RFWD2Q8NHY2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RFWD2Q8NHY2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RFWD2Q8NHY2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.21■■□□□ 1.63
RFWD2Q8NHY2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.2■■□□□ 1.63
RFWD2Q8NHY2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.19■■□□□ 1.62
RFWD2Q8NHY2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.19■■□□□ 1.62
RFWD2Q8NHY2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
RFWD2Q8NHY2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.18■■□□□ 1.62
RFWD2Q8NHY2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
RFWD2Q8NHY2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RFWD2Q8NHY2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RFWD2Q8NHY2 AP004833.2-201ENST00000532228 1454 ntBASIC25.17■■□□□ 1.62
RFWD2Q8NHY2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.17■■□□□ 1.62
RFWD2Q8NHY2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RFWD2Q8NHY2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.16■■□□□ 1.62
RFWD2Q8NHY2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.15■■□□□ 1.62
RFWD2Q8NHY2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.15■■□□□ 1.62
RFWD2Q8NHY2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RFWD2Q8NHY2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
RFWD2Q8NHY2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RFWD2Q8NHY2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.14■■□□□ 1.62
RFWD2Q8NHY2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFWD2Q8NHY2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFWD2Q8NHY2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
RFWD2Q8NHY2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RFWD2Q8NHY2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFWD2Q8NHY2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
RFWD2Q8NHY2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.13■■□□□ 1.61
RFWD2Q8NHY2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFWD2Q8NHY2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFWD2Q8NHY2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFWD2Q8NHY2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFWD2Q8NHY2 AL133380.1-201ENST00000506013 324 ntBASIC25.12■■□□□ 1.61
RFWD2Q8NHY2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFWD2Q8NHY2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFWD2Q8NHY2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFWD2Q8NHY2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
RFWD2Q8NHY2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFWD2Q8NHY2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFWD2Q8NHY2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFWD2Q8NHY2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFWD2Q8NHY2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.11■■□□□ 1.61
RFWD2Q8NHY2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RFWD2Q8NHY2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFWD2Q8NHY2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
RFWD2Q8NHY2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.1■■□□□ 1.61
RFWD2Q8NHY2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFWD2Q8NHY2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFWD2Q8NHY2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFWD2Q8NHY2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFWD2Q8NHY2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFWD2Q8NHY2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.09■■□□□ 1.61
RFWD2Q8NHY2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFWD2Q8NHY2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
RFWD2Q8NHY2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RFWD2Q8NHY2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.08■■□□□ 1.61
RFWD2Q8NHY2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFWD2Q8NHY2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFWD2Q8NHY2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.05■■□□□ 1.6
RFWD2Q8NHY2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.05■■□□□ 1.6
RFWD2Q8NHY2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFWD2Q8NHY2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFWD2Q8NHY2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
RFWD2Q8NHY2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFWD2Q8NHY2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RFWD2Q8NHY2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RFWD2Q8NHY2 AC091060.1-201ENST00000623524 1766 ntBASIC25.03■■□□□ 1.6
RFWD2Q8NHY2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFWD2Q8NHY2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.02■■□□□ 1.6
RFWD2Q8NHY2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFWD2Q8NHY2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms